Evidence map›Paper›PMID 32424203›Full record

ArticleNature communications2020

Sphingolipids produced by gut bacteria enter host metabolic pathways impacting ceramide levels.

Elizabeth L Johnson, Stacey L Heaver, Jillian L Waters, Benjamin I Kim, Alexis Bretin, Andrew L Goodman, Andrew T Gewirtz, Tilla S Worgall, Ruth E Ley

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 199 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
199citing papers in PubMed, 2 pooled it
17.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

199 citing papers in PubMed, 2 syntheses or guidelines pooled it, 339 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Trial
  4. Review
  5. Review
  6. Review
  7. Article
  8. Article
  9. Article
  10. Bacterial-derived cyclic lipopeptides suppress dauer arrest inbioRxiv : the preprint server for biology · 2026
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  11. Review
  12. Crosstalk in the cold: host-microbe interactions in insect diapause.Annals of the Entomological Society of America · 2026
    Review
  13. Review
  14. Infection and immunity · 2026
    Article
  15. Article
  16. Review
  17. A Microbial Lipid-ATP Synthase Axis Fuels NK Cell Antitumor Activity.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
    Article
  18. Review
  19. Review
  20. Article

139 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 2 countries.

Elizabeth L JohnsonDepartment of Microbiome Science, Max Planck Institute for Developmental Biology, Tübingen, 72076, Germany.ORCID http://orcid.org/0000-0002-8290-1122
Stacey L HeaverDepartment of Microbiome Science, Max Planck Institute for Developmental Biology, Tübingen, 72076, Germany.
Jillian L WatersDepartment of Microbiome Science, Max Planck Institute for Developmental Biology, Tübingen, 72076, Germany.
Benjamin I KimDepartment of Pathology and Cell Biology, Columbia University, New York, NY, 10032, USA.
Alexis BretinCenter for Inflammation, Immunity, and Infection, Institute for Biomedical Sciences, Georgia State University, Atlanta, GA, 30303, USA.
Andrew L GoodmanDepartment of Microbial Pathogenesis, Yale University School of Medicine, New Haven, CT, 06520, USA.ORCID http://orcid.org/0000-0001-7599-3471
Andrew T GewirtzCenter for Inflammation, Immunity, and Infection, Institute for Biomedical Sciences, Georgia State University, Atlanta, GA, 30303, USA.
Tilla S WorgallDepartment of Pathology and Cell Biology, Columbia University, New York, NY, 10032, USA.
Ruth E LeyDepartment of Microbiome Science, Max Planck Institute for Developmental Biology, Tübingen, 72076, Germany. rley@tuebingen.mpg.de.ORCID http://orcid.org/0000-0002-9087-1672
Max Planck Institute for Developmental Biology · DEColumbia University · USGeorgia State University · USYale University · US

Funding

Yale Clinical and Translational Science Award (U Component)UL1TR001863 · NCATS · YALE UNIVERSITY · PI John H. Krystal, LUCILA OHNO-MACHADO · 2016 to 2026
$102.9M
Development of immunization strategies to reshape pathogenic microbiomesDP2OD007444 · OD · CORNELL UNIVERSITY · PI LEY, RUTH EMILY · 2010 to 2010
$2.3M
NCATS NIH HHS UL1 TR001863NIH HHS DP2 OD007444
6 · The paper itself

Abstract

Gut microbes are linked to host metabolism, but specific mechanisms remain to be uncovered. Ceramides, a type of sphingolipid (SL), have been implicated in the development of a range of metabolic disorders from insulin resistance (IR) to hepatic steatosis. SLs are obtained from the diet and generated by de novo synthesis in mammalian tissues. Another potential, but unexplored, source of mammalian SLs is production by Bacteroidetes, the dominant phylum of the gut microbiome. Genomes of Bacteroides spp. and their relatives encode serine palmitoyltransfease (SPT), allowing them to produce SLs. Here, we explore the contribution of SL-production by gut Bacteroides to host SL homeostasis. In human cell culture, bacterial SLs are processed by host SL-metabolic pathways. In mouse models, Bacteroides-derived lipids transfer to host epithelial tissue and the hepatic portal vein. Administration of B. thetaiotaomicron to mice, but not an SPT-deficient strain, reduces de novo SL production and increases liver ceramides. These results indicate that gut-derived bacterial SLs affect host lipid metabolism.

Indexed as

Gastrointestinal MicrobiomeMetabolic Networks and PathwaysAnimalsBacteroidesCaco-2 CellsCeramidesEpithelial CellsGerm-Free LifeHumansInsulin ResistanceIntestinal MucosaLiverMiceMutationSerine C-PalmitoyltransferaseSphingolipidsCeramidesSerine C-PalmitoyltransferaseSphingolipids

Identifiers

PMID32424203
PMCPMC7235224
OpenAlexW3024651515

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.