Evidence map›Paper›PMID 32423384›Full record

ArticleBMC gastroenterology2020

Association analysis between SNPs in LATS1 and LATS2 and non-cardia gastric cancer.

Li-Cong Ma, Xu-Yang Tian, Fang Gao, Wen-Jie Dong, Tong Dang, Yan-Bin Jia

Open access · goldAbstract read
In one paragraph

Article in BMC gastroenterology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
1.6field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 17 citations in OpenAlex.

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4 · The record

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5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Li-Cong MaInner Mongolia Institute of Digestive Diseases, The Second Affiliated Hospital of Baotou Medical College, 30 Hudemulin Street, Baotou, 014030, Inner Mongolia, China.
Xu-Yang TianInner Mongolia Institute of Digestive Diseases, The Second Affiliated Hospital of Baotou Medical College, 30 Hudemulin Street, Baotou, 014030, Inner Mongolia, China.
Fang GaoSchool of Medical Technology, Baotou Medical College, Baotou, 014060, Inner Mongolia, China.
Wen-Jie DongSchool of Basic Medicine and Forensic Medicine, Baotou Medical College, Baotou, 014060, Inner Mongolia, China.
Tong DangInner Mongolia Institute of Digestive Diseases, The Second Affiliated Hospital of Baotou Medical College, 30 Hudemulin Street, Baotou, 014030, Inner Mongolia, China. dtong999@sina.com.
Yan-Bin JiaInner Mongolia Institute of Digestive Diseases, The Second Affiliated Hospital of Baotou Medical College, 30 Hudemulin Street, Baotou, 014030, Inner Mongolia, China. jyb690318@hotmail.com.
Baotou Medical College · CN

Funding

National Natural Science Foundation of China 81250024National Natural Science Foundation of China 81650017Natural Science Foundation of Inner Mongolia 2016MS0805Science and Technology Planning Project of Baotou City 2019Z3011-01Scientific Research Fund of Baotou Medical College BYJJ-DF-201603Scientific Research Fund of Baotou Medical College BYJJ-QM-2018024Scientific Research Fund of Baotou Medical College BYJJ-YF-2018023
6 · The paper itself

Abstract

backgroundMany studies have found that large tumor suppressor kinase 1 (LATS1) and LATS2 play important roles in many diseases, but studies have been rare on the relationship between these genes and non-cardia gastric cancer (GC). We performed a case-control association study to investigate the associations between single nucleotide polymorphisms (SNPs) in LATS1 and LATS2 genes and Helicobacter pylori (H. pylori) infection as well as the risk of non-cardia GC.

methodsFirst, H. pylori infection was determined by the serological test using enzyme-linked immunoassay. Then genotyping of SNPs was performed for 808 samples by the Taqman method. Finally, unconditional logistic regression was used to calculate the odds ratios (ORs) and 95% confidence intervals (CIs), adjusted for age and gender, for the association of each SNP with the infection of H. pylori, the risk of non-cardia gastric cancer, as well as the expression of LATS1 and LATS2 proteins in non-cardia GC tissues, using the codominant, dominant, recessive, overdominant, and log-additive inheritance models, respectively.

resultsThe statistical results showed that LATS2 rs9552315 was associated with H. pylori infection, and the CC + CT genotype could reduce the risk of H. pylori infection (odds ratio [OR]: 0.549, 95% confidence interval [CI]: 0.339-0.881, P < 0.05) compared with the TT genotype in a dominant model. LATS1 rs9393175 was associated with the risk of non-cardia GC, and the AG genotype reduced the risk of non-cardia GC (OR: 0.702, 95% CI: 0.516-0.952, P < 0.05) compared with the GG + AA genotype in an overdominant model. LATS2 rs9509492 was associated with the risk of GC in an log-additive model. No associations were found between five SNPs and expression of LATS1 and LATS2 proteins in non-cardia GC tissue.

conclusionsLATS2 rs9552315 CT genotype may be a protective factor against infection of H. pylori. LATS1 rs9393175 AG genotype and LATS2 rs9509492 GG genotype may be protective factors for non-cardia GC.

Indexed as

AgedCase-Control StudiesFemaleGenetic Predisposition to DiseaseGenotypeHelicobacter InfectionsHelicobacter pyloriHumansLogistic ModelsMaleMiddle AgedOdds RatioPolymorphism, Single NucleotideProtein Serine-Threonine KinasesRisk FactorsStomach NeoplasmsLATS1 protein, humanLATS2 protein, humanProtein Serine-Threonine KinasesTumor Suppressor ProteinsAssociation studyLATS1LATS2Non-cardia gastric cancer

Identifiers

PMID32423384
PMCPMC7236108
OpenAlexW3028167183

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.