Evidence map›Paper›PMID 32420128›Full record

ArticleTranslational andrology and urology2020

A comprehensive evaluation of differentially expressed mRNAs and lncRNAs in cystitis glandularis with gene ontology, KEGG pathway, and ceRNA network analysis.

Chao Li, Jiao Hu, Peihua Liu, Qiaqia Li, Jinbo Chen, Yu Cui, Xu Zhou, Bichen Xue, Xin Zhang, Xin Gao and 1 more

Open access · diamondAbstract read
In one paragraph

Article in Translational andrology and urology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.3field-weighted citation impact, top 51% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 6 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Chao LiDepartment of Urology, Xiangya Hospital, Central South University, Changsha 410008, China.
Jiao HuDepartment of Urology, Xiangya Hospital, Central South University, Changsha 410008, China.
Peihua LiuDepartment of Urology, Xiangya Hospital, Central South University, Changsha 410008, China.
Qiaqia LiXiangya School of Medicine, Central South University, Changsha 410008, China.
Jinbo ChenDepartment of Urology, Xiangya Hospital, Central South University, Changsha 410008, China.
Yu CuiDepartment of Urology, Xiangya Hospital, Central South University, Changsha 410008, China.
Xu ZhouReproductive Medicine Center, Xiangya Hospital, Central South University, Changsha 410008, China.
Bichen XueXiangya School of Medicine, Central South University, Changsha 410008, China.
Xin ZhangDepartment of Urology, Xiangya Hospital, Central South University, Changsha 410008, China.
Xin GaoDepartment of Urology, Xiangya Hospital, Central South University, Changsha 410008, China.
Xiongbing ZuDepartment of Urology, Xiangya Hospital, Central South University, Changsha 410008, China.
Xiangya Hospital Central South University · CNCentral South University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundCystitis glandularis (CG) is a proliferative disorder of the urinary bladder characterized by transitional cells that have undergone glandular metaplasia. The underlying mechanism associated with this transformation is poorly understood.

methodsThe expression of messenger RNA (mRNA) and long non-coding RNA (lncRNA) from normal bladder mucosa and CG were compared using microarray analysis. Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis was used to describe molecular interactions.

resultsMicroarray analysis identified 809 significantly dysregulated mRNAs in CG tissues; 606 were up-regulated and 203 were down-regulated (greater than 2-fold difference in expression from normal tissue, P<0.05). KEGG pathway analysis showed that the mRNAs that co-expressed with lncRNAs were enriched in the cell cycle regulation pathway. Four up-regulated lncRNAs (ENST00000596379, ENST00000463397, NR_001446 and NR_015395) were identified in the coding-non-coding co-expression (CNC) network analysis as being associated with the expression of four mRNAs (SMAD3, ORC1, CCNA2 and CCNB2). NR_015395 was revealed to be a competing endogenous RNA (ceRNA) of miR-133a-3p that targets SMAD3.

conclusionsThis is the first work to measure the expression of dysregulated lncRNA and ceRNA in CG and identify the crosstalk between mRNA and lncRNA expression patterns in the pathogenesis of CG.

Indexed as

co-expressioncompeting endogenous RNA (ceRNA)Cystitis glandularis (CG)long non-coding RNA (lncRNA)microarray

Identifiers

PMID32420128
PMCPMC7214972
OpenAlexW3012236283

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.