Evidence map›Paper›PMID 32419951›Full record

ArticleMicrosystems & nanoengineering2020

Spatially resolved and multiplexed MicroRNA quantification from tissue using nanoliter well arrays.

Maxwell B Nagarajan, Augusto M Tentori, Wen Cai Zhang, Frank J Slack, Patrick S Doyle

Abstract read
In one paragraph

Article in Microsystems & nanoengineering, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. Review
  9. Spatial Multiplexing and Omics.Nature reviews. Methods primers · 2024
    Article
  10. Article
  11. Review
  12. Review
  13. Article
  14. Article
  15. Clinical and translational values of spatial transcriptomics.Signal transduction and targeted therapy · 2022
    Review
  16. Review
  17. Review
  18. Review
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Maxwell B Nagarajan1Department of Chemical Engineering, Massachusetts Institute of Technology, Cambridge, MA 02139 USA.ORCID 0000-0003-3207-3282
Augusto M Tentori1Department of Chemical Engineering, Massachusetts Institute of Technology, Cambridge, MA 02139 USA.ORCID 0000-0003-4596-0059
Wen Cai Zhang2HMS Initiative for RNA Medicine, Department of Pathology, Harvard Medical School, Beth Israel Deaconess Medical Center, Boston, MA 02215 USA.ORCID 0000-0002-5274-527X
Frank J Slack2HMS Initiative for RNA Medicine, Department of Pathology, Harvard Medical School, Beth Israel Deaconess Medical Center, Boston, MA 02215 USA.
Patrick S Doyle1Department of Chemical Engineering, Massachusetts Institute of Technology, Cambridge, MA 02139 USA.ORCID 0000-0003-2147-9172

Funding

VIRUS PRODUCTION COREP30CA014051 · NCI · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI Paula T Hammond · 1985 to 2026
$93.9M
Yale SPORE in Lung Cancer (YSILC): The Biology and Personalized Treatment of Lung CancerP50CA196530 · NCI · YALE UNIVERSITY · PI Kurt A Schalper · 2015 to 2026
$31.1M
Training Program in Angiogenesis &InflammationT32HL007893 · NHLBI · BETH ISRAEL DEACONESS MEDICAL CENTER · PI DVORAK, HAROLD FISHER · 1998 to 2017
$5.5M
Microengineered Technologies for Quantitative, Multiplexed and Spatially Resolved Measurement of miRNA in Tissue SectionsR01CA235740 · NCI · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI DOYLE, PATRICK S, SLACK, FRANK J. · 2019 to 2023
$1.8M
Microfluidic Integrative Circulating miRNA Profiling for Cancer DiagnosisR21EB024101 · NIBIB · UNIVERSITY OF KANSAS LAWRENCE · PI DOYLE, PATRICK S, ZENG, YONG · 2017 to 2018
$411k
NCI NIH HHS P30 CA014051NCI NIH HHS P50 CA196530NCI NIH HHS R01 CA235740NHLBI NIH HHS T32 HL007893NIBIB NIH HHS R21 EB024101
6 · The paper itself

Abstract

Spatially resolved gene expression patterns are emerging as a key component of medical studies, including companion diagnostics, but technologies for quantification and multiplexing are limited. We present a method to perform spatially resolved and multiplexed microRNA (miRNA) measurements from formalin-fixed, paraffin-embedded (FFPE) tissue. Using nanoliter well arrays to pixelate the tissue section and photopatterned hydrogels to quantify miRNA, we identified differentially expressed miRNAs in tumors from a genetically engineered mouse model for non-small cell lung cancer (K-ras

Indexed as

ChemistryEngineering

Identifiers

PMID32419951
PMCPMC7211184

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.