Evidence map›Paper›PMID 32418907›Full record

ArticleJournal of proteomics2020

Aberrant energy metabolism and redox balance in seizure onset zones of epileptic patients.

Ryan A Grove, Deepak Madhavan, Cory H T Boone, Camila Pereira Braga, Zuzana Papackova, Hannah Kyllo, Kaeli Samson, Kristina Simeone, Timothy Simeone, Tomas Helikar and 2 more

Open access · greenAbstract read
In one paragraph

Article in Journal of proteomics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.5field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. Review
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  4. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 2 countries.

Ryan A GroveDepartment of Biochemistry, University of Nebraska-Lincoln, Lincoln, NE 68588, United States of America.
Deepak MadhavanDepartment of Neurological Sciences, University of Nebraska Medical Center, Omaha, NE 68198, United States of America.
Cory H T BooneDepartment of Biochemistry, University of Nebraska-Lincoln, Lincoln, NE 68588, United States of America.
Camila Pereira BragaDepartment of Biochemistry, University of Nebraska-Lincoln, Lincoln, NE 68588, United States of America.
Zuzana PapackovaCenter for Experimental Medicine, Institute for Clinical and Experimental Medicine, Prague, CZ, Czech Republic; Czech University of Life Science Prague, Faculty of Agrobiology-Food and Natural Recourses, Department of Veterinary Science, Prague, CZ, Czech Republic.
Hannah KylloDepartment of Neurological Sciences, University of Nebraska Medical Center, Omaha, NE 68198, United States of America.
Kaeli SamsonDepartment of Pharmacology, Creighton University School of Medicine, Omaha, NE 68178, United States of America.
Kristina SimeoneDepartment of Pharmacology, Creighton University School of Medicine, Omaha, NE 68178, United States of America.
Timothy SimeoneDepartment of Pharmacology, Creighton University School of Medicine, Omaha, NE 68178, United States of America.
Tomas HelikarDepartment of Biochemistry, University of Nebraska-Lincoln, Lincoln, NE 68588, United States of America.
Corrine K HansonCollege of Allied Health Professions, University of Nebraska Medical Center, Omaha, NE, 68198, United States of America.
Jiri AdamecDepartment of Biochemistry, University of Nebraska-Lincoln, Lincoln, NE 68588, United States of America. Electronic address: jadamec2@unl.edu.
University of Nebraska–Lincoln · USCreighton University · USUniversity of Nebraska Medical Center · USInstitute of Clinical and Experimental Medicine · CZ

Funding

The role of stress in the fetal origin of obesity and metabolic dysfunctionP20GM104320 · NIGMS · UNIVERSITY OF NEBRASKA LINCOLN · PI ZEMPLENI, JANOS · 2014 to 2024
$24.9M
THE REDOX-MEDIATED REGULATION OF IRON-RESPONSIVE GENE EXPRESSION IN LIVERP20RR017675 · NCRR · UNIVERSITY OF NEBRASKA LINCOLN · PI BECKER, DONALD F · 2002 to 2011
$20.4M
Software for collaborative construction, simulation, and analysis of mechanistic computational models of biological systemsR35GM119770 · NIGMS · UNIVERSITY OF NEBRASKA LINCOLN · PI Tomas Helikar · 2016 to 2026
$4.4M
PPARgamma, Epilepsy and TherapeuticsR01NS085389 · NINDS · CREIGHTON UNIVERSITY · PI SIMEONE, TIMOTHY A. · 2014 to 2018
$1.5M
Adenosine, Hypocretin and Sleep Disorder Comorbidities Associated with EpilepsyR01NS072179 · NINDS · CREIGHTON UNIVERSITY · PI SIMEONE, KRISTINA A · 2012 to 2016
$1.5M
NCRR NIH HHS P20 RR017675NIGMS NIH HHS P20 GM104320NIGMS NIH HHS R35 GM119770NINDS NIH HHS R01 NS072179NINDS NIH HHS R01 NS085389
6 · The paper itself

Abstract

Epilepsy is a disorder that affects around 1% of the population. Approximately one third of patients do not respond to anti-convulsant drugs treatment. To understand the underlying biological processes involved in drug resistant epilepsy (DRE), a combination of proteomics strategies was used to compare molecular differences and enzymatic activities in tissue implicated in seizure onset to tissue with no abnormal activity within patients. Label free quantitation identified 17 proteins with altered abundance in the seizure onset zone as compared to tissue with normal activity. Assessment of oxidative protein damage by protein carbonylation identified additional 11 proteins with potentially altered function in the seizure onset zone. Pathway analysis revealed that most of the affected proteins are involved in energy metabolism and redox balance. Further, enzymatic assays showed significantly decreased activity of transketolase indicating a disruption of the Pentose Phosphate Pathway and diversion of intermediates into purine metabolic pathway, resulting in the generation of the potentially pro-convulsant metabolites. Altogether, these findings suggest that imbalance in energy metabolism and redox balance, pathways critical to proper neuronal function, play important roles in neuronal network hyperexcitability and can be used as a primary target for potential therapeutic strategies to combat DRE. SIGNIFICANCE: Epileptic seizures are some of the most difficult to treat neurological disorders. Up to 40% of patients with epilepsy are resistant to first- and second-line anticonvulsant therapy, a condition that has been classified as refractory epilepsy. One potential therapy for this patient population is the ketogenic diet (KD), which has been proven effective against multiple refractory seizure types However, compliance with the KD is extremely difficult, and carries severe risks, including ketoacidosis, renal failure, and dangerous electrolyte imbalances. Therefore, identification of pathways disruptions or shortages can potentially uncover cellular targets for anticonvulsants, leading to a personalized treatment approach depending on a patient's individual metabolic signature.

Indexed as

EpilepsySeizuresAnticonvulsantsEnergy MetabolismHumansOxidation-ReductionAnticonvulsantsDrug resistant epilepsyProtein carbonylationProteomicsSeizure

Identifiers

PMID32418907
PMCPMC10588813
OpenAlexW3023985077

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.