Evidence map›Paper›PMID 32417669›Full record

ReviewDNA repair2020

New insights into abasic site repair and tolerance.

Petria S Thompson, David Cortez

Abstract readReview
In one paragraph

Review in DNA repair, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 104 papers.

0numbers the graph read from it
0cells of the map it votes in
104citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

104 citing papers in PubMed.

  1. Article
  2. DNA Structure-Dependent Enrichment of Oxidative Lesions.Chemical research in toxicology · 2026
    Article
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  9. Review
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  14. Review
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  20. Article

44 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Petria S ThompsonVanderbilt University School of Medicine, Department of Biochemistry, Nashville, TN, 37232, USA.
David CortezVanderbilt University School of Medicine, Department of Biochemistry, Nashville, TN, 37232, USA. Electronic address: david.cortez@vanderbilt.edu.

Funding

Functions of SRAP domain proteins in DNA metabolismR01ES030575 · NIEHS · VANDERBILT UNIVERSITY · PI David K Cortez · 2019 to 2026
$3.9M
Determining the Function of HMCES in DNA Replication and RepairF30CA228242 · NCI · VANDERBILT UNIVERSITY · PI THOMPSON, PETRIA · 2018 to 2021
$121k
NCI NIH HHS F30 CA228242NIEHS NIH HHS R01 ES030575
6 · The paper itself

Abstract

Thousands of apurinic/apyrimidinic (AP or abasic) sites form in each cell, each day. This simple DNA lesion can have profound consequences to cellular function, genome stability, and disease. As potent blocks to polymerases, they interfere with the reading and copying of the genome. Since they provide no coding information, they are potent sources of mutation. Due to their reactive chemistry, they are intermediates in the formation of lesions that are more challenging to repair including double-strand breaks, interstrand crosslinks, and DNA protein crosslinks. Given their prevalence and deleterious consequences, cells have multiple mechanisms of repairing and tolerating these lesions. While base excision repair of abasic sites in double-strand DNA has been studied for decades, new interest in abasic site processing has come from more recent insights into how they are processed in single-strand DNA. In this review, we discuss the source of abasic sites, their biological consequences, tolerance mechanisms, and how they are repaired in double and single-stranded DNA.

Indexed as

DNA DamageDNA RepairAnimalsBacteriaDNADNA, Single-StrandedEukaryotaGenomic InstabilityHumansDNADNA, Single-StrandedAbasic siteBase excision repairDNA-protein crosslinksGenome stabilityHMCES

Identifiers

PMID32417669
PMCPMC7299775

What OpenQuestion holds

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LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.