Evidence map›Paper›PMID 32414342›Full record

SynthesisBMC medical genetics2020

HTRA1 rs11200638 variant and AMD risk from a comprehensive analysis about 15,316 subjects.

Ying Liu, Huipeng Jin, Dong Wei, Wenxiu Li

Open access · goldAbstract readMeta-Analysis
In one paragraph

Synthesis in BMC medical genetics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.3field-weighted citation impact, top 43% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Mouse Choroid Proteome Revisited: Focus on Aging.Advances in experimental medicine and biology · 2023
    Article
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Ying LiuOphthalmic function room, Hongqi Hospital Affiliated to Mudanjiang Medical College, Mudanjiang, 157000, Heilongjiang Province, China.
Huipeng JinOphthalmic function room, Hongqi Hospital Affiliated to Mudanjiang Medical College, Mudanjiang, 157000, Heilongjiang Province, China.
Dong WeiDepartment of Ophthalmology (three disease areas), Hongqi Hospital Affiliated to Mudanjiang Medical College, Mudanjiang, 157000, Heilongjiang Province, China. hqyywd@163.com.ORCID 0000-0002-0020-5642
Wenxiu LiDepartment of Critical Medicine, Second People's Hospital of Mudanjiang, Mudanjiang, 157000, Heilongjiang Province, China.
Mudanjiang Medical University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe high-temperature requirement factor A1 (HTRA1) gene located at 10q26 locus has been associated with age-related macular degenerative (AMD), with the significantly related polymorphism being (rs11200638, -625G/A), however, above association is not consistent. We investigated a comprehensive analysis to evaluate the correlations between rs11200638 polymorphism and AMD susceptibility thoroughly addressing this issue.

methodsAn identification was covered from the PubMed and Wanfang databases until 27th Jan, 2020. Odds ratios (OR) with 95% confidence intervals (CI) were applied to evaluate the associations. After a thorough and meticulous search, 35 different articles (33 case-control studies with HWE, 22 case-control studies about wet/dry AMD) were retrieved.

resultsIndividuals carrying A-allele or AA genotype may have an increased risk to be AMD disease. For example, there has a significantly increased relationship between rs11200638 polymorphism and AMD both for Asians (OR: 2.51, 95%CI: 2.22-2.83 for allelic contrast) and Caucasians [OR (95%CI) = 2.63(2.29-3.02) for allelic contrast]. Moreover, a similar trend in the source of control was detected. To classify the type of AMD, increased association was also observed in both wet (OR: 3.40, 95%CI: 2.90-3.99 for dominant model) and dry (OR: 2.08, 95%CI: 1.24-3.48 for dominant model) AMD. Finally, based on the different genotyping methods, increased relationships were identified by sequencing, TaqMan, PCR-RFLP and RT-PCR.

conclusionsOur meta-analysis demonstrated that HTRA1 rs11200638 polymorphism may be related to the AMD development, especially about individuals carrying A-allele or AA genotype, who may be as identified targets to detect and intervene in advance. Further studies using Larger sample size studies, including information about gene-environment interactions will be necessary to carry out.

Indexed as

AllelesGenetic Association StudiesGenetic Predisposition to DiseaseGenetic VariationEpistasis, GeneticFemaleGlobal HealthHigh-Temperature Requirement A Serine Peptidase 1HumansMacular DegenerationMaleOdds RatioPolymorphism, Single NucleotidePublication BiasRisk AssessmentRisk FactorsHigh-Temperature Requirement A Serine Peptidase 1HTRA1 protein, humanAge-related macular degenerationHigh-temperature requirement factor A1Meta-analysisPolymorphismRisk

Identifiers

PMID32414342
PMCPMC7229611
OpenAlexW3025800285

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.