Evidence map›Paper›PMID 32411543›Full record

ArticleIEEE journal of translational engineering in health and medicine2020

Real-Time Lung Tumor Tracking Using a CUDA Enabled Nonrigid Registration Algorithm for MRI.

Nazanin Tahmasebi, Pierre Boulanger, Jihyun Yun, Gino Fallone, Michelle Noga, Kumaradevan Punithakumar

Abstract read
In one paragraph

Article in IEEE journal of translational engineering in health and medicine, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Review
  3. Article
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Nazanin Tahmasebi1Department of Radiology and Diagnostic ImagingUniversity of AlbertaEdmontonABT6G 2R3Canada.
Pierre Boulanger1Department of Radiology and Diagnostic ImagingUniversity of AlbertaEdmontonABT6G 2R3Canada.
Jihyun Yun4Medical Physics DivisionDepartment of OncologyUniversity of AlbertaEdmontonABT6G 2R3Canada.
Gino Fallone4Medical Physics DivisionDepartment of OncologyUniversity of AlbertaEdmontonABT6G 2R3Canada.
Michelle Noga1Department of Radiology and Diagnostic ImagingUniversity of AlbertaEdmontonABT6G 2R3Canada.
Kumaradevan Punithakumar1Department of Radiology and Diagnostic ImagingUniversity of AlbertaEdmontonABT6G 2R3Canada.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

objectiveThis study intends to develop an accurate, real-time tumor tracking algorithm for the automated radiation therapy for cancer treatment using Graphics Processing Unit (GPU) computing. Although a previous moving mesh based tumor tracking approach has been shown to be successful in delineating the tumor regions from a sequence of magnetic resonance image, the algorithm is computationally intensive and its computation time on standard Central Processing Unit (CPU) processors is too slow to be used clinically especially for automated radiation therapy system.

methodA re-implementation of the algorithm on a low-cost parallel GPU-based computing platform is utilized to accelerate this computation at a speed that is amicable to clinical usages. Several components in the registration algorithm such as the computation of similarity metric are inherently parallel which fits well with the GPU parallel processing capabilities. Solving a partial differential equation numerically to generate the mesh deformation is one of the computationally intensive components which has been accelerated by utilizing a much faster shared memory on the GPU.

resultsImplemented on an NVIDIA Tesla K40c GPU, the proposed approach yielded a computational acceleration improvement of over 5 times its implementation on a CPU. The proposed approach yielded an average Dice score of 0.87 evaluated over 600 images acquired from six patients.

conclusionThis study demonstrated that the GPU computing approach can be used to accelerate tumor tracking for automated radiation therapy for mobile lung tumors. Clinical Impact: Accurately tracking mobile tumor boundaries in real-time is important to automate radiation therapy and the proposed study offers an excellent option for fast tumor region tracking for cancer treatment.

Indexed as

compute unified device architectureGPU computingimage segmentationlung mobile tumorsNon-rigid image registrationparallel computingradiation therapytumor tracking

Identifiers

PMID32411543
PMCPMC7217296

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.