Evidence map›Paper›PMID 32410644›Full record

ArticleParasites & vectors2020

Genetic diversity and phylogenetic relationships of tsetse flies of the palpalis group in Congo Brazzaville based on mitochondrial cox1 gene sequences.

Abraham Mayoke, Shadrack M Muya, Rosemary Bateta, Paul O Mireji, Sylvance O Okoth, Samuel G Onyoyo, Joanna E Auma, Johnson O Ouma

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Article in Parasites & vectors, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

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5citing papers in PubMed
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3 · Its place in the literature

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5 citing papers in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

8 authors.

Abraham MayokeDepartment of Molecular Biology and Biotechnology, Pan African University Institute for Basic Sciences, Technology & Innovation, PO Box 62000-00200, Nairobi, Kenya. abraham.mayoke@students.jkuat.ac.ke.ORCID http://orcid.org/0000-0001-8740-1349
Shadrack M MuyaJomo Kenyatta University of Agriculture and Technology, Faculty of Biological Sciences, PO Box 62000-00200, Nairobi, Kenya.
Rosemary BatetaKenya Agricultural and Livestock Research Organization, Biotechnology Research Institute, PO Box 362-00902, Kikuyu, Kenya.
Paul O MirejiKenya Agricultural and Livestock Research Organization, Biotechnology Research Institute, PO Box 362-00902, Kikuyu, Kenya.
Sylvance O OkothKenya Agricultural and Livestock Research Organization, Biotechnology Research Institute, PO Box 362-00902, Kikuyu, Kenya.
Samuel G OnyoyoKenya Agricultural and Livestock Research Organization, Biotechnology Research Institute, PO Box 362-00902, Kikuyu, Kenya.
Joanna E AumaKenya Agricultural and Livestock Research Organization, Biotechnology Research Institute, PO Box 362-00902, Kikuyu, Kenya.
Johnson O OumaAfrican Technical Research Centre, Vector Health International, P.O. Box 15500, Arusha, Tanzania.

Funding

Control of Tsetse Fly Transmitted Diseases in KenyaU01AI115648 · NIAID · YALE UNIVERSITY · PI AKSOY, SERAP · 2015 to 2019
$3.6M
Tsetse Transmitted African TrypanosomiasisD43TW007391 · FIC · YALE UNIVERSITY · PI AKSOY, SERAP · 2008 to 2017
$1.8M
FIC NIH HHS D43 TW007391NIAID NIH HHS U01 AI115648
6 · The paper itself

Abstract

backgroundDespite the morphological characterization established in the 1950s and 1960s, the identity of extant taxa that make up Glossina fuscipes (s.l.) in the Congo remains questionable. Previous claims of overlap between G. fuscipes (believed to be G. f. quanzensis) and G. palpalis palpalis around Brazzaville city further complicate the taxonomic status and population dynamics of the two taxa. This study aimed to determine the phylogenetic relationships between G. fuscipes (s.l.) and G. p. palpalis and to assess genetic variation among G. fuscipes (s.l.) populations in Congo Brazzaville.

methodsWe collected 263 G. fuscipes (s.l.) from northern and central regions, and 65 G. p. palpalis from southern part of the country. The mitochondrial cytochrome c oxidase subunit 1 (cox1) gene was amplified using taxa-specific primer pairs. Sequence data were analyzed in DnaSP and Arlequin to assess the genetic diversity, differentiation and demographic history of G. fuscipes (s.l.) populations.

resultsThe general BLAST analysis yielded a similarity of 99% for G. fuscipes (s.l.) and G. p. palpalis. BLASTn analysis for G. fuscipes (s.l.) showed > 98% identity with GenBank sequences for G. fuscipes (s.l.), with BEMB population showing 100% similarity with G. f. fuscipes. Glossina fuscipes (s.l.) populations showed high haplotype diversity (H = 46, Hd = 0.884), moderate nucleotide diversity ( = 0.012) and moderate (F

conclusionsPhylogenetic analysis revealed minor differences between G. fuscipes (s.l.) and G. p. palpalis. Genetic diversity of G. fuscipes (s.l.) was high in the populations sampled except one. Genetic differentiation ranged from moderate to high among subpopulations. There was a restricted gene flow between G. fuscipes (s.l.) populations in the north and central part of the country. Genetic signatures based on cox1 showed recent expansion and recovery of G. fuscipes (s.l.) populations from previous bottlenecks. To fully understand the species distribution limits, we recommend further studies involving a wider sampling scheme including the swampy Mossaka focus for G. fuscipes (s.l.) and the entire range of G. p. palpalis in South Congo.

Indexed as

Genetic VariationPhylogenyAnimalsCongoCyclooxygenase 1Evolution, MolecularFemaleGenes, MitochondrialInsect VectorsMaleMicrosatellite RepeatsTsetse FliesCyclooxygenase 1Congo BrazzavilleCytochrome c oxidaseGenetic diversityGlossina fuscipesGlossina palpalis palpalismtDNAPhylogenyTaxonomy

Identifiers

PMID32410644
PMCPMC7227191

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.