Evidence map›Paper›PMID 32407419›Full record

ArticlePloS one2020

Identification of a new R3 MYB type repressor and functional characterization of the members of the MBW transcriptional complex involved in anthocyanin biosynthesis in eggplant (S. melongena L.).

Andrea Moglia, Francesco Elia Florio, Sergio Iacopino, Alessandra Guerrieri, Anna Maria Milani, Cinzia Comino, Larenzo Barchi, Arianna Marengo, Cecilia Cagliero, Patrizia Rubiolo and 4 more

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in PloS one, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
2.3field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 43 citations in OpenAlex.

  1. Article
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  12. Cyanidin-3-O-glucoside Contributes to Leaf Color Change by Regulating TwoInternational journal of molecular sciences · 2023
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  13. Characterization of Highbush Blueberry (Current issues in molecular biology · 2023
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  14. Flavonoids - flowers, fruit, forage and the future.Journal of the Royal Society of New Zealand · 2023
    Review
  15. Article
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  20. Mutations in theFrontiers in plant science · 2022
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

14 authors at 4 institutions in 2 countries.

Andrea MogliaDepartment of Agricultural, Forest and Food Sciences, Plant Genetics and Breeding, University of Torino, Grugliasco (TO), Italy.
Francesco Elia FlorioCREA, Research Centre for Genomics and Bioinformatics, Montanaso Lombardo (LO), Italy.
Sergio IacopinoPlantLab, Scuola Superiore Sant'Anna, Institute of Life Sciences, Ghezzano (PI), Italy.
Alessandra GuerrieriPlant Hormone Biology Group, Swammerdam Institute for Life Sciences (SILS), University of Amsterdam, Amsterdam, The Netherlands.
Anna Maria MilaniDepartment of Agricultural, Forest and Food Sciences, Plant Genetics and Breeding, University of Torino, Grugliasco (TO), Italy.
Cinzia CominoDepartment of Agricultural, Forest and Food Sciences, Plant Genetics and Breeding, University of Torino, Grugliasco (TO), Italy.
Larenzo BarchiDepartment of Agricultural, Forest and Food Sciences, Plant Genetics and Breeding, University of Torino, Grugliasco (TO), Italy.
Arianna MarengoDepartment of Drug Science and Technology, University of Torino, Torino (TO), Italy.
Cecilia CaglieroDepartment of Drug Science and Technology, University of Torino, Torino (TO), Italy.ORCID 0000-0003-3512-6124
Patrizia RubioloDepartment of Drug Science and Technology, University of Torino, Torino (TO), Italy.ORCID 0000-0002-6819-2614
Laura ToppinoCREA, Research Centre for Genomics and Bioinformatics, Montanaso Lombardo (LO), Italy.
Giuseppe Leonardo RotinoCREA, Research Centre for Genomics and Bioinformatics, Montanaso Lombardo (LO), Italy.
Sergio LanteriDepartment of Agricultural, Forest and Food Sciences, Plant Genetics and Breeding, University of Torino, Grugliasco (TO), Italy.
Laura BassolinoCREA, Research Centre for Genomics and Bioinformatics, Montanaso Lombardo (LO), Italy.ORCID 0000-0002-7242-0499
University of Turin · ITNetherlands Institute for Neuroscience · NLResearch Centre for Cereal and Industrial Crops · ITUniversity of Pisa · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Here we focus on the highly conserved MYB-bHLH-WD repeat (MBW) transcriptional complex model in eggplant, which is pivotal in the transcriptional regulation of the anthocyanin biosynthetic pathway. Through a genome-wide approach performed on the recently released Eggplant Genome (cv. 67/3) previously identified, and reconfirmed by us, members belonging to the MBW complex (SmelANT1, SmelAN2, SmelJAF13, SmelAN1) were functionally characterized. Furthermore, a regulatory R3 MYB type repressor (SmelMYBL1), never reported before, was identified and characterized as well. Through a qPCR approach, we revealed specific transcriptional patterns of candidate genes in different plant tissue/organs at two stages of fruit development. Two strategies were adopted for investigating the interactions of bHLH partners (SmelAN1, SmelJAF13) with MYB counterparts (SmelANT1, SmelAN2 and SmelMYBL1): Yeast Two Hybrid (Y2H) and Bimolecular Fluorescent Complementation (BiFC) in A. thaliana mesophylls protoplast. Agro-infiltration experiments highlighted that N. benthamiana leaves transiently expressing SmelANT1 and SmelAN2 showed an anthocyanin-pigmented phenotype, while their co-expression with SmelMYBL1 prevented anthocyanin accumulation. Our results suggest that SmelMYBL1 may inhibits the MBW complex via the competition with MYB activators for bHLH binding site, although this hypothesis requires further elucidation.

Indexed as

Amino Acid SequenceAnthocyaninsBasic Helix-Loop-Helix ProteinsGene Expression Regulation, PlantGenes, PlantGenes, RegulatorMultigene FamilyNicotianaPhylogenyPlant ProteinsPlants, Genetically ModifiedRecombinant ProteinsRepressor ProteinsSolanum melongenaAnthocyaninsBasic Helix-Loop-Helix ProteinsPlant ProteinsRecombinant ProteinsRepressor Proteins

Identifiers

PMID32407419
PMCPMC7224497
OpenAlexW3025217136

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.