Evidence map›Paper›PMID 32406050›Full record

ArticleBrazilian journal of microbiology : [publication of the Brazilian Society for Microbiology]2020

The correlation analyses of bacterial community composition and spatial factors between freshwater and sediment in Poyang Lake wetland by using artificial neural network (ANN) modeling.

Ran Sun, Zuxin Tu, Lin Fan, Zixia Qiao, Xiaoyan Liu, Sihai Hu, Guohua Zheng, Yaoguo Wu, Ruiwu Wang, Xiaohui Mi

Abstract read
In one paragraph

Article in Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology], 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
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  4. Nitrogen species control the interaction between NOEnvironmental science and pollution research international · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Ran SunSchool of Chemistry and Chemical Engineering, Northwestern Polytechnical University, Xi'An, 710129, China.ORCID http://orcid.org/0000-0002-4724-2504
Zuxin TuInstitute of Microbiology, Jiangxi Academy of Sciences, Nanchang, 330029, China.
Lin FanSchool of Chemistry and Chemical Engineering, Northwestern Polytechnical University, Xi'An, 710129, China.
Zixia QiaoSchool of Chemistry and Chemical Engineering, Northwestern Polytechnical University, Xi'An, 710129, China.
Xiaoyan LiuSchool of Chemistry and Chemical Engineering, Northwestern Polytechnical University, Xi'An, 710129, China.
Sihai HuSchool of Chemistry and Chemical Engineering, Northwestern Polytechnical University, Xi'An, 710129, China.
Guohua ZhengInstitute of Microbiology, Jiangxi Academy of Sciences, Nanchang, 330029, China.
Yaoguo WuSchool of Chemistry and Chemical Engineering, Northwestern Polytechnical University, Xi'An, 710129, China. wuygal@nwpu.edu.cn.
Ruiwu WangSchool of Ecology and Environment, Northwestern Polytechnical University, Xi'An, 710129, China. wangrw@nwpu.edu.cn.
Xiaohui MiSchool of Chemistry and Chemical Engineering, Northwestern Polytechnical University, Xi'An, 710129, China.

Funding

Fundamental Research Funds for the Central Universities 3102018zy042National College Students Innovation and Entrepreneurship Training Program S201910699176National Natural Science Foundation of China 41601338Natural Science Foundation of Shaanxi Province 2018JQ4019Natural Science Foundation of Shaanxi Province 2020JM-110
6 · The paper itself

Abstract

As one of the most important components of the lake ecosystem, microorganisms from the freshwater and sediment play an important role in many ecological processes. However, the difference and correlation of bacterial community between these two niches were not clear. This study investigated the diversity of microbial community of freshwater and sediment samples from fifteen locations in Poyang Lake wetland. The correlation between the bacterial community and physicochemical property of Poyang Lake wetland was analyzed by artificial neural network (ANN). Our results demonstrated that the freshwater and sediment bacterial community were dominated by groups of the Bacteroidetes (23.33%) and β-Proteobacteria (22.54%) separately, whereas, Canalipalpata, Bacillariophyta, Gemmatimonadetes, and Verrucomicrobia were detected in freshwater niches only. Phylogenetic analysis further indicated that bacterial composition in freshwater significantly differed with the sediment niches. There are 34 unique species accounted for 85% in fresh water samples and 28 unique species accounted for 82% in sediment samples. Cluster analysis further proved that all the samples from freshwater niches clustered closely together, far from the rest sediment samples. ANN analysis revealed that the freshwater with high N and P nutrients will greatly increase the diversity of the bacterial communities. In general, both environmental physicochemical properties, not each factor independently, contributed to the shift in the bacterial community structure. The five tributaries (Gan, Fu, Xin, Rao, Xiu Rivers) play a vital role in shaping the bacterial communities of Poyang Lake. This study provides new insights for understanding of microbial community compositions and structures of Poyang Lake wetland.

Indexed as

MicrobiotaBacteriaChinaGeologic SedimentsLakesNeural Networks, ComputerNitrogenPhosphorusPhylogenyWetlandsNitrogenPhosphorusArtificial neural networkBacterial community compositionDenaturing gradient gel electrophoresisPhylogenetic analysisPoyang Lake

Identifiers

PMID32406050
PMCPMC7455635

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.