Evidence map›Paper›PMID 32404058›Full record

ArticleBMC medical genetics2020

TNF-α - 308 G/A and IFN-γ + 874 A/T gene polymorphisms in Saudi patients with cutaneous leishmaniasis.

Ahmed A Ahmed, Zafar Rasheed, Tarek Salem, Mohammed S Al-Dhubaibi, Ahmad A Al Robaee, Abdullateef A Alzolibani

Open access · goldAbstract read
In one paragraph

Article in BMC medical genetics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed, 1 pooled it
1.6field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 1 synthesis or guideline pooled it, 15 citations in OpenAlex.

  1. Pooled it
  2. The functional TNF-αBreast cancer research and treatment · 2025
    Article
  3. Observational
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Ahmed A AhmedResearch Center, College of Medicine, Qassim University, Buraidah, Saudi Arabia.
Zafar RasheedDepartment of Medical Biochemistry, College of Medicine, Qassim University, P.O. Box 6655, Buraidah, KSA, 51452, Saudi Arabia. zafarrasheed@qumed.edu.sa.ORCID 0000-0002-8651-4218
Tarek SalemDepartment of Medical Biochemistry, College of Medicine, Qassim University, P.O. Box 6655, Buraidah, KSA, 51452, Saudi Arabia.
Mohammed S Al-DhubaibiDepartment of Dermatology, College of Medicine, Qassim University, Buraidah, Saudi Arabia.
Ahmad A Al RobaeeDepartment of Dermatology, College of Medicine, Qassim University, Buraidah, Saudi Arabia.
Abdullateef A AlzolibaniDepartment of Dermatology, College of Medicine, Qassim University, Buraidah, Saudi Arabia.
Qassim University · SA

Funding

King Abdulaziz City for Science and Technology NSTIP/KACST # 11-MED1068-09
6 · The paper itself

Abstract

backgroundCutaneous leishmaniasis (CL) is well linked with immunogenetic factors. This study was undertaken to test the association of TNF-α - 308 and IFN-γ + 874 gene polymorphisms with the susceptibility of Leishmania (L) species among CL patients in central region of Saudi Arabia.

methodsThis is a case-control study involved 169 Saudi subjects with different L. species and 199 healthy controls from central region of Saudi Arabia. All subjects were characterized by TNF-α - 308 G/A and IFN-γ + 874 A/T gene polymorphisms using PCR.

resultsEvaluation of genotyping and allelic frequency of TNF-α - 308 G/A in different L. species showed no significant association compared to controls (p > 0.05). Except, in cases of L. tropica that showed significantly higher TNF-α - 308 A versus G allele frequency (p = 0.0004). Evaluation of genotyping of IFN-γ + 874 (TT versus AA+AT recessive) and allelic frequency of IFN-γ + 874 (T versus A) showed significant higher in L. major and also in total CL cases as compared to healthy controls (p < 0.05). Furthermore, a strong association was observed between the susceptibility of L. major, L. tropica or total CL cases with synergistically combined high TNF-α 308/INF-γ 874 alleles.

conclusionsThis is the first report that shows the gene polymorphisms of TNF-α - 308 G/A and IFN-γ + 874 A/T in Saudi patients with different L. species infections. Data showed that the TNF-α-308 G/A gene polymorphism is not associated with the susceptibility of CL in Saudi subjects. The only correlation was found in between A versus G allelic frequency in L. tropica. Importantly, IFN-γ + 874 A/T polymorphism was found to be associated with the susceptibility of L. major and also with total CL subjects. Moreover, data from synergistically combined high TNF-α 308/INF-γ 874 alleles strongly suggest their potential role in the susceptibility of leishmania infection.

Indexed as

AllelesGenetic Predisposition to DiseasePolymorphism, Single NucleotideAdultCase-Control StudiesFemaleGene FrequencyGenotypeHumansInterferon-gammaLeishmaniaLeishmaniasis, CutaneousMalePolymerase Chain ReactionSaudi ArabiaTumor Necrosis Factor-alphaInterferon-gammaTumor Necrosis Factor-alphaCutaneous leishmaniasisGene polymorphismIFN-γL. majorL. tropicaTNF-α

Identifiers

PMID32404058
PMCPMC7218653
OpenAlexW3026239929

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.