Evidence map›Paper›PMID 32403408›Full record

ReviewMolecules (Basel, Switzerland)2020

Predicting Drug Resistance Using Deep Mutational Scanning.

Gur Pines, Reilly G Fankhauser, Carrie A Eckert

Abstract readReview
In one paragraph

Review in Molecules (Basel, Switzerland), 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Review
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Gur PinesDepartment of Entomology, Agricultural Research Organization, Volcani Center, P.O.B 15159, Rishon LeZion 7505101, Israel.ORCID 0000-0002-1757-6722
Reilly G FankhauserDepartment of Dermatology, Oregon Health & Science University, Baird Hall 3225 SW Pavilion Loop, Portland, OR 97239, USA.ORCID 0000-0001-6318-4255
Carrie A EckertRenewable and Sustainable Energy Institute, University of Colorado Boulder, 027 UCB, Boulder, CO 80309, USA.

Funding

Multiplex sequence to activity mapping at the pathway scaleR21AI128296 · NIAID · UNIVERSITY OF COLORADO · PI GILL, RYAN T · 2017 to 2018
$424k
National Institute of Allergy and Infectious Diseases 1R21AI128296-01A1
6 · The paper itself

Abstract

Drug resistance is a major healthcare challenge, resulting in a continuous need to develop new inhibitors. The development of these inhibitors requires an understanding of the mechanisms of resistance for a critical mass of occurrences. Recent genome editing technologies based on high-throughput DNA synthesis and sequencing may help to predict mutations resulting in resistance by testing large mutagenesis libraries. Here we describe the rationale of this approach, with examples and relevance to drug development and resistance in malaria.

Indexed as

MutagenesisAldose-Ketose IsomerasesAnti-Bacterial AgentsDirected Molecular EvolutionDrug ResistanceEscherichia coliFosfomycinGene LibraryMalariaMutationPlasmodium falciparumSaccharomyces cerevisiae1-deoxy-D-xylulose 5-phosphate reductoisomeraseAldose-Ketose IsomerasesAnti-Bacterial AgentsFosfomycinfosmidomycindrug resistanceDXRfosmidomycingenome editingsequence to activity mapping

Identifiers

PMID32403408
PMCPMC7248951

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.