Evidence map›Paper›PMID 32403257›Full record

ArticleGenes2020

Evolutionary Variability of W-Linked Repetitive Content in Lacertid Lizards.

Grzegorz Suwala, Marie Altmanová, Sofia Mazzoleni, Emmanouela Karameta, Panayiotis Pafilis, Lukáš Kratochvíl, Michail Rovatsos

Open access · goldAbstract readComparative Study
In one paragraph

Article in Genes, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 23 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Chromosome-level genome assembly of Lilford's wall lizard, Podarcis lilfordi (Günther, 1874) from the Balearic Islands (Spain).DNA research : an international journal for rapid publication of reports on genes and genomes · 2023
    Article
  6. Article
  7. Article
  8. Sex chromosome evolution among amniotes: is the origin of sex chromosomes non-random?Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2021
    Article
  9. Review
  10. Article
  11. Article
  12. With or Without W? Molecular and Cytogenetic Markers are Not Sufficient for Identification of Environmentally-Induced Sex Reversal in the Bearded Dragon.Sexual development : genetics, molecular biology, evolution, endocrinology, embryology, and pathology of sex determination and differentiation · 2021
    Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Grzegorz SuwalaDepartment of Ecology, Faculty of Science, Charles University, 12844 Prague, Czech Republic.ORCID 0000-0002-2748-6229
Marie AltmanováDepartment of Ecology, Faculty of Science, Charles University, 12844 Prague, Czech Republic.
Sofia MazzoleniDepartment of Ecology, Faculty of Science, Charles University, 12844 Prague, Czech Republic.
Emmanouela KarametaDepartment of Zoology and Marine Biology, Faculty of Biology, University of Athens, 15784 Athens, Greece.
Panayiotis PafilisDepartment of Zoology and Marine Biology, Faculty of Biology, University of Athens, 15784 Athens, Greece.
Lukáš KratochvílDepartment of Ecology, Faculty of Science, Charles University, 12844 Prague, Czech Republic.ORCID 0000-0002-3515-729X
Michail RovatsosDepartment of Ecology, Faculty of Science, Charles University, 12844 Prague, Czech Republic.ORCID 0000-0002-8429-5680
Charles University · CZNational and Kapodistrian University of Athens · GR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Lacertid lizards are a widely radiated group of squamate reptiles with long-term stable ZZ/ZW sex chromosomes. Despite their family-wide homology of Z-specific gene content, previous cytogenetic studies revealed significant variability in the size, morphology, and heterochromatin distribution of their W chromosome. However, there is little evidence about the accumulation and distribution of repetitive content on lacertid chromosomes, especially on their W chromosome. In order to expand our knowledge of the evolution of sex chromosome repetitive content, we examined the topology of telomeric and microsatellite motifs that tend to often accumulate on the sex chromosomes of reptiles in the karyotypes of 15 species of lacertids by fluorescence in situ hybridization (FISH). The topology of the above-mentioned motifs was compared to the pattern of heterochromatin distribution, as revealed by C-banding. Our results show that the topologies of the examined motifs on the W chromosome do not seem to follow a strong phylogenetic signal, indicating independent and species-specific accumulations. In addition, the degeneration of the W chromosome can also affect the Z chromosome and potentially also other parts of the genome. Our study provides solid evidence that the repetitive content of the degenerated sex chromosomes is one of the most evolutionary dynamic parts of the genome.

Indexed as

Evolution, MolecularAnimalsChromosome BandingChromosomesFemaleHeterochromatinIn Situ Hybridization, FluorescenceKaryotypeLizardsMaleMicrosatellite RepeatsNucleotide MotifsPhylogenyRepetitive Sequences, Nucleic AcidSex ChromosomesSpecies SpecificityHeterochromatinC-bandingevolutionFISHGATAheterochromatinkaryotypemicrosatellitessex chromosomestelomeres

Identifiers

PMID32403257
PMCPMC7290949
OpenAlexW3020875825

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.