Evidence map›Paper›PMID 32400038›Full record

ReviewMass spectrometry reviews2021

THE MAKING OF A FOOTPRINT IN PROTEIN FOOTPRINTING: A REVIEW IN HONOR OF MICHAEL L. GROSS.

Alan McKenzie-Coe, Raquel Shortt, Lisa M Jones

Abstract readReview
In one paragraph

Review in Mass spectrometry reviews, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Review
  2. Review
  3. Article
  4. Review
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Alan McKenzie-CoeDepartment of Pharmaceutical Sciences, University of Maryland Baltimore, Baltimore, Maryland, 21201.
Raquel ShorttDepartment of Pharmaceutical Sciences, University of Maryland Baltimore, Baltimore, Maryland, 21201.
Lisa M JonesDepartment of Pharmaceutical Sciences, University of Maryland Baltimore, Baltimore, Maryland, 21201.

Funding

EXPAND PARTICIPATION BY MINORITIES IN BIOMEDICAL SCIENCER25GM055036 · NIGMS · UNIVERSITY OF MARYLAND BALTIMORE COUNTY · PI SUMMERS, MICHAEL FINLEY · 1996 to 2021
$16.9M
Development of an In Vivo Footprinting Method Coupled with Mass Spectrometry in C. elegansR01GM127595 · NIGMS · UNIVERSITY OF MARYLAND BALTIMORE · PI JONES, LISA M · 2018 to 2021
$1.4M
Development of a novel pulse-chase in-cell footprinting method for protein folding analysisR01GM128985 · NIGMS · UNIVERSITY OF MARYLAND BALTIMORE · PI JONES, LISA M · 2018 to 2021
$1.2M
NIGMS NIH HHS R01 GM127595NIGMS NIH HHS R01 GM128985NIGMS NIH HHS R25 GM055036
6 · The paper itself

Abstract

Within the past decade protein footprinting in conjunction with mass spectrometry has become a powerful and versatile means to unravel the higher order structure of proteins. Footprinting-based approaches has demonstrated the capacity to inform on interaction sites and dynamic regions that participate in conformational changes. These findings when set in a biological perspective inform on protein folding/unfolding, protein-protein interactions, and protein-ligand interactions. In this review, we will look at the contribution of Dr. Michael L. Gross to protein footprinting approaches such as hydrogen deuterium exchange mass spectrometry and hydroxyl radical protein footprinting. This review details the development of novel footprinting methods as well as their applications to study higher order protein structure. © 2020 The Authors. Mass Spectrometry Reviews published by John Wiley & Sons Ltd. Mass Spec Rev.

Indexed as

Deuterium Exchange MeasurementEpitope MappingHydrogen-Ion ConcentrationLigandsMass SpectrometryPhotochemistryProtein FootprintingProteinsSolutionsTitrimetryLigandsProteinsSolutionshigher order structurehydrogen deuterium exchangehydroxyl radical protein footprintingprotein footprinting

Identifiers

PMID32400038
PMCPMC7849054

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.