Evidence map›Paper›PMID 32399915›Full record

ArticleGeroScience2020

Hypoxic response regulators RHY-1 and EGL-9/PHD promote longevity through a VHL-1-independent transcriptional response.

Joseph C P Kruempel, Hillary A Miller, Megan L Schaller, Abrielle Fretz, Marshall Howington, Marjana Sarker, Shijiao Huang, Scott F Leiser

Open access · greenAbstract read
In one paragraph

Article in GeroScience, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.2field-weighted citation impact, top 53% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 11 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Joseph C P KruempelMolecular & Integrative Physiology Department, University of Michigan, Ann Arbor, MI, 48109, USA.
Hillary A MillerCellular and Molecular Biology Graduate Program, University of Michigan, Ann Arbor, MI, 48109, USA.
Megan L SchallerMolecular & Integrative Physiology Department, University of Michigan, Ann Arbor, MI, 48109, USA.
Abrielle FretzMolecular & Integrative Physiology Department, University of Michigan, Ann Arbor, MI, 48109, USA.
Marshall HowingtonCellular and Molecular Biology Graduate Program, University of Michigan, Ann Arbor, MI, 48109, USA.
Marjana SarkerMolecular & Integrative Physiology Department, University of Michigan, Ann Arbor, MI, 48109, USA.
Shijiao HuangMolecular & Integrative Physiology Department, University of Michigan, Ann Arbor, MI, 48109, USA.
Scott F LeiserMolecular & Integrative Physiology Department, University of Michigan, Ann Arbor, MI, 48109, USA. leiser@umich.edu.ORCID 0000-0002-8003-2955
University of Michigan · US

Funding

SPECIFICITY OF OXYGEN DNA DAMAGE AND MUTAGENESISP01AG001751 · NIA · UNIVERSITY OF WASHINGTON · PI MACCOSS, MICHAEL · 1985 to 2021
$29.6M
University of Washington Nathan Shock Center of Excellence in the Basic Biology of AgingP30AG013280 · NIA · UNIVERSITY OF WASHINGTON · PI Su-In Lee · 1995 to 2026
$27.1M
Enhancing and expanding the CGC Strain CollectionP40OD010440 · OD · UNIVERSITY OF MINNESOTA · PI Aric L Daul, Ann E. Rougvie · 2012 to 2026
$7.5M
TRAINING PROGRAM IN ORGANOGENESIST32HD007505 · NICHD · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI PASCA DI MAGLIANO, MARINA, SPENCE, JASON · 1997 to 2021
$6.9M
Mechanisms of cell non-autonomous signaling through the hypoxic responseR01AG058717 · NIA · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI LEISER, SCOTT F · 2019 to 2023
$1.6M
The mechanisms of serotonin-based signaling in food perception and DR-mediated longevityF31AG060663 · NIA · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI MILLER, HILLARY ANN · 2018 to 2020
$93k
NIA NIH HHS F31 AG060663NIA NIH HHS P01 AG001751NIA NIH HHS P30 AG013280NIA NIH HHS R01 AG058717NICHD NIH HHS T32 HD007505NIH HHS P40 OD010440
6 · The paper itself

Abstract

HIF-1-mediated adaptation to changes in oxygen availability is a critical aspect of healthy physiology. HIF is regulated by a conserved mechanism whereby EGLN/PHD family members hydroxylate HIF in an oxygen-dependent manner, targeting it for ubiquitination by Von-Hippel-Lindau (VHL) family members, leading to its proteasomal degradation. The activity of the only C. elegans PHD family member, EGL-9, is also regulated by a hydrogen sulfide sensing cysteine-synthetase-like protein, CYSL-1, which is, in turn, regulated by RHY-1/acyltransferase. Over the last decade, multiple seminal studies have established a role for the hypoxic response in regulating longevity, with mutations in vhl-1 substantially extending C. elegans lifespan through a HIF-1-dependent mechanism. However, studies on other components of the hypoxic signaling pathway that similarly stabilize HIF-1 have shown more mixed results, suggesting that mutations in egl-9 and rhy-1 frequently fail to extend lifespan. Here, we show that egl-9 and rhy-1 mutants suppress the long-lived phenotype of vhl-1 mutants. We also show that RNAi of rhy-1 extends lifespan of wild-type worms while decreasing lifespan of vhl-1 mutant worms. We further identify VHL-1-independent gene expression changes mediated by EGL-9 and RHY-1 and find that a subset of these genes contributes to longevity regulation. The resulting data suggest that changes in HIF-1 activity derived by interactions with EGL-9 likely contribute greatly to its role in regulation of longevity.

Indexed as

Caenorhabditis elegansCaenorhabditis elegans ProteinsAcyltransferasesAnimalsCullin ProteinsGene Expression RegulationLongevityOxygenAcyltransferasesCaenorhabditis elegans ProteinsCullin ProteinsEgl-9 protein, C elegansOxygenrhy-1 protein, C elegansVHL-1 protein, C elegansAgingC. elegansEGL-9/PHDHIF-1 signalingHypoxic responseLifespanRHY-1

Identifiers

PMID32399915
PMCPMC7732922
OpenAlexW3024955073

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.