Evidence map›Paper›PMID 32398827›Full record

ArticleNature structural & molecular biology2020

RTEL1 suppresses G-quadruplex-associated R-loops at difficult-to-replicate loci in the human genome.

Wei Wu, Rahul Bhowmick, Ivan Vogel, Özgün Özer, Fiorella Ghisays, Roshan S Thakur, Esther Sanchez de Leon, Philipp H Richter, Liqun Ren, John H Petrini and 2 more

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In one paragraph

Article in Nature structural & molecular biology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 61 papers.

0numbers the graph read from it
0cells of the map it votes in
61citing papers in PubMed
5.1field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

61 citing papers in PubMed, 93 citations in OpenAlex.

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1 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 2 institutions in 4 countries.

Wei Wu *Center for Chromosome Stability, University of Copenhagen, Copenhagen, Denmark.ORCID http://orcid.org/0000-0003-3929-2090
Rahul Bhowmick *Center for Chromosome Stability, University of Copenhagen, Copenhagen, Denmark.
Ivan VogelCenter for Chromosome Stability, University of Copenhagen, Copenhagen, Denmark.
Özgün ÖzerCenter for Chromosome Stability, University of Copenhagen, Copenhagen, Denmark.
Fiorella GhisaysLaboratory of Chromosome Biology, Memorial Sloan-Kettering Cancer Center, New York, NY, USA.
Roshan S ThakurCenter for Chromosome Stability, University of Copenhagen, Copenhagen, Denmark.ORCID http://orcid.org/0000-0001-5284-4975
Esther Sanchez de LeonLaboratory of Chromosome Biology, Memorial Sloan-Kettering Cancer Center, New York, NY, USA.
Philipp H RichterCenter for Chromosome Stability, University of Copenhagen, Copenhagen, Denmark.
Liqun RenCenter for Chromosome Stability, University of Copenhagen, Copenhagen, Denmark.
John H PetriniLaboratory of Chromosome Biology, Memorial Sloan-Kettering Cancer Center, New York, NY, USA.
Ian D HicksonCenter for Chromosome Stability, University of Copenhagen, Copenhagen, Denmark. iandh@sund.ku.dk.ORCID http://orcid.org/0000-0002-0583-566X
Ying LiuCenter for Chromosome Stability, University of Copenhagen, Copenhagen, Denmark. ying@sund.ku.dk.ORCID http://orcid.org/0000-0003-3703-2498
University of Copenhagen · DKMemorial Sloan Kettering Cancer Center · US

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Nicholas D Socci · 1985 to 2026
$347.4M
MSKCC Pilot Center for Precision Disease ModelingU54OD020355 · OD · SLOAN-KETTERING INST CAN RESEARCH · PI LOWE, SCOTT W., SOLIT, DAVID B. · 2015 to 2019
$9.9M
ROLES OF MRELL AND RAD50 IN THE DNA DAMAGE RESPONSER01GM056888 · NIGMS · UNIVERSITY OF WISCONSIN MADISON · PI PETRINI, JOHN HJ · 1998 to 2019
$8.6M
NIGMS NIH HHS R01 GM056888
6 · The paper itself

Abstract

Oncogene activation during tumorigenesis generates DNA replication stress, a known driver of genome rearrangements. In response to replication stress, certain loci, such as common fragile sites and telomeres, remain under-replicated during interphase and subsequently complete locus duplication in mitosis in a process known as 'MiDAS'. Here, we demonstrate that RTEL1 (regulator of telomere elongation helicase 1) has a genome-wide role in MiDAS at loci prone to form G-quadruplex-associated R-loops, in a process that is dependent on its helicase function. We reveal that SLX4 is required for the timely recruitment of RTEL1 to the affected loci, which in turn facilitates recruitment of other proteins required for MiDAS, including RAD52 and POLD3. Our findings demonstrate that RTEL1 is required for MiDAS and suggest that RTEL1 maintains genome stability by resolving conflicts that can arise between the replication and transcription machineries.

Indexed as

G-QuadruplexesMitosisAnimalsCell LineDNA HelicasesDNA Polymerase IIIGenome, HumanGenomic InstabilityHumansImmunoprecipitationMiceMultifunctional EnzymesNucleic Acid ConformationRad52 DNA Repair and Recombination ProteinRecombinasesRibonuclease HDNA HelicasesDNA Polymerase IIIMultifunctional EnzymesPOLD3 protein, humanRad52 DNA Repair and Recombination ProteinRAD52 protein, humanRecombinasesRibonuclease Hribonuclease HIRNA HelicasesRTEL1 protein, humanSETX protein, humanSLX4 protein, human

Identifiers

PMID32398827
OpenAlexW3023861005

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.