Evidence map›Paper›PMID 32397421›Full record

ArticleSensors (Basel, Switzerland)2020

EventDTW: An Improved Dynamic Time Warping Algorithm for Aligning Biomedical Signals of Nonuniform Sampling Frequencies.

Yihang Jiang, Yuankai Qi, Will Ke Wang, Brinnae Bent, Robert Avram, Jeffrey Olgin, Jessilyn Dunn

Abstract read
In one paragraph

Article in Sensors (Basel, Switzerland), 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Yihang JiangThe Departments of Biomedical Engineering and Biostatistics & Bioinformatics, Duke University, Durham, NC 27708, USA.
Yuankai QiThe Departments of Biomedical Engineering and Biostatistics & Bioinformatics, Duke University, Durham, NC 27708, USA.
Will Ke WangThe Departments of Biomedical Engineering and Biostatistics & Bioinformatics, Duke University, Durham, NC 27708, USA.
Brinnae BentThe Departments of Biomedical Engineering and Biostatistics & Bioinformatics, Duke University, Durham, NC 27708, USA.ORCID 0000-0002-7039-0177
Robert AvramThe Division of Cardiology and the Cardiovascular Research Institute, University of California San Francisco, San Francisco, CA 94143, USA.ORCID 0000-0002-8490-0270
Jeffrey OlginThe Division of Cardiology and the Cardiovascular Research Institute, University of California San Francisco, San Francisco, CA 94143, USA.
Jessilyn DunnThe Departments of Biomedical Engineering and Biostatistics & Bioinformatics, Duke University, Durham, NC 27708, USA.ORCID 0000-0002-3241-8183

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The dynamic time warping (DTW) algorithm is widely used in pattern matching and sequence alignment tasks, including speech recognition and time series clustering. However, DTW algorithms perform poorly when aligning sequences of uneven sampling frequencies. This makes it difficult to apply DTW to practical problems, such as aligning signals that are recorded simultaneously by sensors with different, uneven, and dynamic sampling frequencies. As multi-modal sensing technologies become increasingly popular, it is necessary to develop methods for high quality alignment of such signals. Here we propose a DTW algorithm called EventDTW which uses information propagated from defined events as basis for path matching and hence sequence alignment. We have developed two metrics, the error rate (ER) and the singularity score (SS), to define and evaluate alignment quality and to enable comparison of performance across DTW algorithms. We demonstrate the utility of these metrics on 84 publicly-available signals in addition to our own multi-modal biomedical signals. EventDTW outperformed existing DTW algorithms for optimal alignment of signals with different sampling frequencies in 37% of artificial signal alignment tasks and 76% of real-world signal alignment tasks.

Indexed as

AlgorithmsBiomedical TechnologyTimedynamic time warpingnonuniform samplingsignal alignment

Identifiers

PMID32397421
PMCPMC7273204

What OpenQuestion holds

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.