Evidence map›Paper›PMID 32397240›Full record

ArticleCells2020

Deciphering the Enigma of the Histone H2A.Z-1/H2A.Z-2 Isoforms: Novel Insights and Remaining Questions.

Manjinder S Cheema, Katrina V Good, Bohyun Kim, Heddy Soufari, Connor O'Sullivan, Melissa E Freeman, Gilda Stefanelli, Ciro Rivera Casas, Kristine E Zengeler, Andrew J Kennedy and 8 more

Abstract read
In one paragraph

Article in Cells, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. Histone variants at a glance.Journal of cell science · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors.

Manjinder S CheemaDepartment of Biochemistry and Microbiology, University of Victoria, Victoria, BC V8W 3P6, Canada.ORCID 0000-0001-8356-8328
Katrina V GoodDepartment of Biochemistry and Microbiology, University of Victoria, Victoria, BC V8W 3P6, Canada.ORCID 0000-0002-9889-4852
Bohyun KimDepartment of Biochemistry and Microbiology, University of Victoria, Victoria, BC V8W 3P6, Canada.
Heddy SoufariInstitut Européen de Chimie et Biologie, Univ. Bordeaux, 2 rue Robert Escarpit, F-33607 Pessac, France.
Connor O'SullivanDepartment of Biochemistry and Microbiology, University of Victoria, Victoria, BC V8W 3P6, Canada.
Melissa E FreemanDepartment of Biochemistry and Microbiology, University of Victoria, Victoria, BC V8W 3P6, Canada.
Gilda StefanelliDepartment of Neurosciences & Mental Health, the Hospital for Sick Children, Toronto, ON M5G 1X8, Canada.
Ciro Rivera CasasEnvironmental Epigenetics Group, Department of Biological Sciences, Florida International UniversityNorth Miami, FL 33181, USA.
Kristine E ZengelerDepartment of Chemistry and Biochemistry, Bates College, 2 Andrews Road, Lewiston, ME 04240, USA.
Andrew J KennedyDepartment of Chemistry and Biochemistry, Bates College, 2 Andrews Road, Lewiston, ME 04240, USA.
Jose Maria Eirin LopezEnvironmental Epigenetics Group, Department of Biological Sciences, Florida International UniversityNorth Miami, FL 33181, USA.ORCID 0000-0002-8041-9770
Perry L HowardDepartment of Biochemistry and Microbiology, University of Victoria, Victoria, BC V8W 3P6, Canada.
Iva B ZovkicDepartment of Neurosciences & Mental Health, the Hospital for Sick Children, Toronto, ON M5G 1X8, Canada.
Jeffrey ShabanowitzDepartment of Chemistry, University of Virginia, Charlottesville, VA 22904, USA.ORCID 0000-0001-5750-3539
Deanna D DryhurstDepartment of Biochemistry and Microbiology, University of Victoria, Victoria, BC V8W 3P6, Canada.
Donald F HuntDepartment of Chemistry, University of Virginia, Charlottesville, VA 22904, USA.
Cameron D MackerethInstitut Européen de Chimie et Biologie, Univ. Bordeaux, 2 rue Robert Escarpit, F-33607 Pessac, France.ORCID 0000-0002-0776-7947
Juan AusióDepartment of Biochemistry and Microbiology, University of Victoria, Victoria, BC V8W 3P6, Canada.ORCID 0000-0002-9674-6717

Funding

PROTEIN SEQUENCING BY TANDEM MASS SPECTROMETRYR01GM037537 · NIGMS · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI HUNT, DONALD F · 1987 to 2023
$17.8M
CIHR MOP 130417NIGMS NIH HHS R01 GM037537
6 · The paper itself

Abstract

The replication independent (RI) histone H2A.Z is one of the more extensively studied variant members of the core histone H2A family, which consists of many replication dependent (RD) members. The protein has been shown to be indispensable for survival, and involved in multiple roles from DNA damage to chromosome segregation, replication, and transcription. However, its functional involvement in gene expression is controversial. Moreover, the variant in several groups of metazoan organisms consists of two main isoforms (H2A.Z-1 and H2A.Z-2) that differ in a few (3-6) amino acids. They comprise the main topic of this review, starting from the events that led to their identification, what is currently known about them, followed by further experimental, structural, and functional insight into their roles. Despite their structural differences, a direct correlation to their functional variability remains enigmatic. As all of this is being elucidated, it appears that a strong functional involvement of isoform variability may be connected to development.

Indexed as

Amino Acid SequenceAnimalsBrainCell CycleChickensChromatinDNA MethylationHistonesHumansLiverMaleMiceNucleosomesOsmolar ConcentrationPhylogenyProtein IsoformsChromatinHistonesNucleosomesProtein IsoformsdevelopmentevolutionH2A.Z-1 and H2A.Z-2NMRreplication dependent (RD) and replication independent (RI) histone variantsspermatogenesistranscription

Identifiers

PMID32397240
PMCPMC7290884

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.