Evidence map›Paper›PMID 32396580›Full record

ArticlePloS one2020

Active Notch signaling is required for arm regeneration in a brittle star.

Vladimir Mashanov, Jennifer Akiona, Maleana Khoury, Jacob Ferrier, Robert Reid, Denis Jacob Machado, Olga Zueva, Daniel Janies

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
5.7field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 31 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Review
  8. Transposon control as a checkpoint for tissue regeneration.Development (Cambridge, England) · 2022
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. [Osteogenic Capacity and Mettl14 and Notch1 Expression of Adipose-Derived Stem Cells from Osteoporotic Rats].Sichuan da xue xue bao. Yi xue ban = Journal of Sichuan University. Medical science edition · 2021
    Article
  16. Article
  17. A roadmap for intestinal regeneration.The International journal of developmental biology · 2021
    Review
  18. Regeneration in Echinoderms: Molecular Advancements.Frontiers in cell and developmental biology · 2021
    Review
  19. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Vladimir MashanovDepartment of Biology, University of North Florida, Jacksonville, FL, United states of America.ORCID 0000-0001-6875-7518
Jennifer AkionaDepartment of Biology, University of North Florida, Jacksonville, FL, United states of America.ORCID 0000-0002-6420-5940
Maleana KhouryDepartment of Biology, University of North Florida, Jacksonville, FL, United states of America.
Jacob FerrierUniversity of North Carolina at Charlotte, Charlotte, NC, United states of America.ORCID 0000-0002-4173-1040
Robert ReidUniversity of North Carolina at Charlotte, Charlotte, NC, United states of America.
Denis Jacob MachadoUniversity of North Carolina at Charlotte, Charlotte, NC, United states of America.ORCID 0000-0001-9858-4515
Olga ZuevaDepartment of Biology, University of North Florida, Jacksonville, FL, United states of America.
Daniel JaniesUniversity of North Carolina at Charlotte, Charlotte, NC, United states of America.
University of North Carolina at Charlotte · USUniversity of North Florida · USForest Institute · US

Funding

R15 AREA project to Develop Genomic and Experimental Resources to Study RegenerationR15GM128066 · NIGMS · UNIVERSITY OF NORTH CAROLINA CHARLOTTE · PI JANIES, DANIEL A. · 2018 to 2018
$461k
6 · The paper itself

Abstract

Cell signaling pathways play key roles in coordinating cellular events in development. The Notch signaling pathway is highly conserved across all multicellular animals and is known to coordinate a multitude of diverse cellular events, including proliferation, differentiation, fate specification, and cell death. Specific functions of the pathway are, however, highly context-dependent and are not well characterized in post-traumatic regeneration. Here, we use a small-molecule inhibitor of the pathway (DAPT) to demonstrate that Notch signaling is required for proper arm regeneration in the brittle star Ophioderma brevispina, a highly regenerative member of the phylum Echinodermata. We also employ a transcriptome-wide gene expression analysis (RNA-seq) to characterize the downstream genes controlled by the Notch pathway in the brittle star regeneration. We demonstrate that arm regeneration involves an extensive cross-talk between the Notch pathway and other cell signaling pathways. In the regrowing arm, Notch regulates the composition of the extracellular matrix, cell migration, proliferation, and apoptosis, as well as components of the innate immune response. We also show for the first time that Notch signaling regulates the activity of several transposable elements. Our data also suggests that one of the possible mechanisms through which Notch sustains its activity in the regenerating tissues is via suppression of Neuralized1.

Indexed as

AnimalsAnimal StructuresDipeptidesDNA Transposable ElementsDown-RegulationEchinodermataReceptors, NotchRegenerationSignal TransductionTranscriptomeUp-RegulationDipeptidesDNA Transposable ElementsN-(N-(3,5-difluorophenacetyl)alanyl)phenylglycine tert-butyl esterReceptors, Notch

Identifiers

PMID32396580
PMCPMC7217437
OpenAlexW3024155612

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.