Evidence map›Paper›PMID 32393898›Full record

ArticleNature chemical biology2020

A small molecule G6PD inhibitor reveals immune dependence on pentose phosphate pathway.

Jonathan M Ghergurovich, Juan C García-Cañaveras, Joshua Wang, Emily Schmidt, Zhaoyue Zhang, Tara TeSlaa, Harshel Patel, Li Chen, Emily C Britt, Marta Piqueras-Nebot and 6 more

Open access · greenAbstract read
In one paragraph

Article in Nature chemical biology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 137 papers.

0numbers the graph read from it
0cells of the map it votes in
137citing papers in PubMed
31.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

137 citing papers in PubMed, 192 citations in OpenAlex.

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77 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

16 authors at 5 institutions in 2 countries.

Jonathan M Ghergurovich *Lewis Sigler Institute for Integrative Genomics, Princeton University, Princeton, NJ, USA.ORCID http://orcid.org/0000-0002-6565-2275
Juan C García-Cañaveras *Lewis Sigler Institute for Integrative Genomics, Princeton University, Princeton, NJ, USA.ORCID http://orcid.org/0000-0001-7112-1537
Joshua WangDepartment of Chemistry, Princeton University, Princeton, NJ, USA.
Emily SchmidtLewis Sigler Institute for Integrative Genomics, Princeton University, Princeton, NJ, USA.
Zhaoyue ZhangLewis Sigler Institute for Integrative Genomics, Princeton University, Princeton, NJ, USA.
Tara TeSlaaLewis Sigler Institute for Integrative Genomics, Princeton University, Princeton, NJ, USA.
Harshel PatelLewis Sigler Institute for Integrative Genomics, Princeton University, Princeton, NJ, USA.ORCID http://orcid.org/0000-0001-5311-1212
Li ChenLewis Sigler Institute for Integrative Genomics, Princeton University, Princeton, NJ, USA.
Emily C BrittMorgridge Institute for Research, Department of Nutritional Sciences, University of Wisconsin-Madison, Madison, WI, USA.
Marta Piqueras-NebotBiomarkers and Precision Medicine Unit, Instituto de Investigación Sanitaria Fundación Hospital La Fe, Valencia, Spain.
Mari Carmen Gomez-CabreraFreshage Research Group, Department of Physiology, Faculty of Medicine, University of Valencia, Valencia, Spain.
Agustín LahozBiomarkers and Precision Medicine Unit, Instituto de Investigación Sanitaria Fundación Hospital La Fe, Valencia, Spain.
Jing FanMorgridge Institute for Research, Department of Nutritional Sciences, University of Wisconsin-Madison, Madison, WI, USA.ORCID http://orcid.org/0000-0002-5326-5358
Ulf H BeierDivision of Nephrology, Department of Pediatrics, Children's Hospital of Philadelphia, University of Pennsylvania, Philadelphia, PA, USA.
Hahn KimDepartment of Chemistry, Princeton University, Princeton, NJ, USA.
Joshua D RabinowitzLewis Sigler Institute for Integrative Genomics, Princeton University, Princeton, NJ, USA. joshr@princeton.edu.ORCID http://orcid.org/0000-0002-1247-4727
Princeton University · USInstituto de Investigación Sanitaria La Fe · ESUniversity of Wisconsin–Madison · USChildren's Hospital of Philadelphia · USUniversitat de València · ES

Funding

Tumor cell metabolism in actionR01CA163591 · NCI · RUTGERS, THE STATE UNIV OF N.J. · PI JOSHUA D RABINOWITZ, Eileen P. White · 2012 to 2026
$7.0M
Metabolism in Action: Quantitative Fluxes in MammalsDP1DK113643 · NIDDK · PRINCETON UNIVERSITY · PI RABINOWITZ, JOSHUA D · 2016 to 2020
$5.7M
NCI NIH HHS R01 CA163591NIDDK NIH HHS DP1 DK113643
6 · The paper itself

Abstract

Glucose is catabolized by two fundamental pathways, glycolysis to make ATP and the oxidative pentose phosphate pathway to make reduced nicotinamide adenine dinucleotide phosphate (NADPH). The first step of the oxidative pentose phosphate pathway is catalyzed by the enzyme glucose-6-phosphate dehydrogenase (G6PD). Here we develop metabolite reporter and deuterium tracer assays to monitor cellular G6PD activity. Using these, we show that the most widely cited G6PD antagonist, dehydroepiandosterone, does not robustly inhibit G6PD in cells. We then identify a small molecule (G6PDi-1) that more effectively inhibits G6PD. Across a range of cultured cells, G6PDi-1 depletes NADPH most strongly in lymphocytes. In T cells but not macrophages, G6PDi-1 markedly decreases inflammatory cytokine production. In neutrophils, it suppresses respiratory burst. Thus, we provide a cell-active small molecule tool for oxidative pentose phosphate pathway inhibition, and use it to identify G6PD as a pharmacological target for modulating immune response.

Indexed as

AnimalsCell LineDehydroepiandrosteroneDose-Response Relationship, DrugEnzyme AssaysEnzyme InhibitorsGlucoseGlucosephosphate DehydrogenaseGlycolysisHCT116 CellsHep G2 CellsHumansImmunity, InnateLymphocyte ActivationLymphocytesMacrophage ActivationDehydroepiandrosteroneEnzyme InhibitorsGlucoseGlucosephosphate DehydrogenaseNADP

Identifiers

PMID32393898
PMCPMC7311271
OpenAlexW3022743377

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.