Evidence map›Paper›PMID 32393881›Full record

ArticleNature plants2020

The lipid code-dependent phosphoswitch PDK1-D6PK activates PIN-mediated auxin efflux in Arabidopsis.

Shutang Tan, Xixi Zhang, Wei Kong, Xiao-Li Yang, Gergely Molnár, Zuzana Vondráková, Roberta Filepová, Jan Petrášek, Jiří Friml, Hong-Wei Xue

Erratum issuedAbstract read
PubMed Publisher
In one paragraph

Article in Nature plants, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
8.8field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 65 citations in OpenAlex.

  1. Article
  2. Article
  3. Split-YFP-coupled interaction-dependent TurboID identifies new functions of basal cell polarity inProceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  4. Genome-Wide Analysis ofInternational journal of molecular sciences · 2025
    Article
  5. Article
  6. Exploring lipid-protein interactions in plant membranes.Journal of experimental botany · 2024
    Review
  7. Keeping D6PK polar.Nature plants · 2024
    Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Mitochondrial GPAT-derived LPA controls auxin-dependent embryonic and postembryonic development.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  16. Review
  17. Auxin Transporters-A Biochemical View.Cold Spring Harbor perspectives in biology · 2022
    Review
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 3 countries.

Shutang TanInstitute of Science and Technology Austria (IST Austria), Klosterneuburg, Austria.ORCID http://orcid.org/0000-0002-0471-8285
Xixi ZhangInstitute of Science and Technology Austria (IST Austria), Klosterneuburg, Austria.ORCID http://orcid.org/0000-0001-7048-4627
Wei KongNational Key Laboratory of Plant Molecular Genetics, CAS Centre for Excellence in Molecular Plant Sciences, Shanghai Institute of Plant Physiology and Ecology, Chinese Academy of Sciences, Shanghai, China.
Xiao-Li YangNational Key Laboratory of Plant Molecular Genetics, CAS Centre for Excellence in Molecular Plant Sciences, Shanghai Institute of Plant Physiology and Ecology, Chinese Academy of Sciences, Shanghai, China.
Gergely MolnárInstitute of Science and Technology Austria (IST Austria), Klosterneuburg, Austria.ORCID http://orcid.org/0000-0001-6205-4723
Zuzana VondrákováInstitute of Experimental Botany, The Czech Academy of Sciences, Prague, Czech Republic.
Roberta FilepováInstitute of Experimental Botany, The Czech Academy of Sciences, Prague, Czech Republic.
Jan PetrášekInstitute of Experimental Botany, The Czech Academy of Sciences, Prague, Czech Republic.
Jiří FrimlInstitute of Science and Technology Austria (IST Austria), Klosterneuburg, Austria. jiri.friml@ist.ac.at.ORCID http://orcid.org/0000-0002-8302-7596
Hong-Wei XueNational Key Laboratory of Plant Molecular Genetics, CAS Centre for Excellence in Molecular Plant Sciences, Shanghai Institute of Plant Physiology and Ecology, Chinese Academy of Sciences, Shanghai, China. hwxue@sjtu.edu.cn.ORCID http://orcid.org/0000-0002-7641-5320
Institute of Science and Technology Austria · ATCzech Academy of Sciences, Institute of Experimental Botany · CZChinese Academy of Sciences · CNShanghai Jiao Tong University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Directional intercellular transport of the phytohormone auxin mediated by PIN-FORMED (PIN) efflux carriers has essential roles in both coordinating patterning processes and integrating multiple external cues by rapidly redirecting auxin fluxes. PIN activity is therefore regulated by multiple internal and external cues, for which the underlying molecular mechanisms are not fully elucidated. Here, we demonstrate that 3'-PHOSPHOINOSITIDE-DEPENDENT PROTEIN KINASE1 (PDK1), which is conserved in plants and mammals, functions as a molecular hub that perceives upstream lipid signalling and modulates downstream substrate activity through phosphorylation. Using genetic analysis, we show that the loss-of-function Arabidopsis pdk1.1 pdk1.2 mutant exhibits a plethora of abnormalities in organogenesis and growth due to defective polar auxin transport. Further cellular and biochemical analyses reveal that PDK1 phosphorylates D6 protein kinase, a well-known upstream activator of PIN proteins. We uncover a lipid-dependent phosphorylation cascade that connects membrane-composition-based cellular signalling with plant growth and patterning by regulating morphogenetic auxin fluxes.

Indexed as

3-Phosphoinositide-Dependent Protein KinasesArabidopsisArabidopsis ProteinsCell MembraneIndoleacetic AcidsMembrane Transport ProteinsPhospholipidsPlant Growth Regulators3-Phosphoinositide-Dependent Protein KinasesArabidopsis ProteinsIndoleacetic AcidsMembrane Transport ProteinsPhospholipidsPlant Growth Regulators

Identifiers

PMID32393881
OpenAlexW3020918769

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.