Evidence map›Paper›PMID 32393213›Full record

ArticleBMC pulmonary medicine2020

Fluoroquinolone resistance and mutational profile of gyrA in pulmonary MDR tuberculosis patients.

Saba Kabir, Zarfishan Tahir, Nadia Mukhtar, Muhammad Sohail, Muhammad Saqalein, Abdul Rehman

Open access · goldAbstract read
In one paragraph

Article in BMC pulmonary medicine, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
0.6field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 48 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 1 country.

Saba KabirDepartment of Microbiology and Molecular Genetics (MMG), University of the Punjab, New Campus Lahore, Lahore, 54590, Pakistan.
Zarfishan TahirInstitute of Public Health, Lahore, Pakistan.
Nadia MukhtarUniversity of Veterinary and Animal Sciences, Lahore, Pakistan.
Muhammad SohailDepartment of Microbiology and Molecular Genetics (MMG), University of the Punjab, New Campus Lahore, Lahore, 54590, Pakistan.
Muhammad SaqaleinGovernment College University, Faisalabad, Pakistan.
Abdul RehmanDepartment of Microbiology and Molecular Genetics (MMG), University of the Punjab, New Campus Lahore, Lahore, 54590, Pakistan. rehman.mmg@pu.edu.pk.
University of the Punjab · PKGovernment College University, Faisalabad · PKUniversity of Health Sciences Lahore · PKUniversity of Veterinary and Animal Sciences · PK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundFluoroquinolones (FQs) are potential drugs that inhibit DNA synthesis and are used in the treatment of multidrug-resistant tuberculosis (TB) and short-term anti-TB regimens. In recent years, a high proportion of FQ resistance has been observed in Mycobacterium tuberculosis isolates. The development of FQ resistance in multidrug-resistant TB negatively impacts patient treatment outcome and is a serious threat to control of TB.

methodsThe study included a total of 562 samples from patients with pulmonary TB that had been on anti-tuberculosis therapy. MTBDRsl assays were performed for the molecular detection of mutations. Sequence analysis was performed for the characterization and mutational profiling of FQ-resistant isolates.

resultsFQ resistance was observed in 104 samples (18.5%), most of which were previously treated and treatment failure cases. A total of 102 isolates had mutations in DNA gyrase subunit A (gyrA), while mutations in gyrB were observed in only two isolates. Mutational analysis revealed that the mutations mostly alter codons 94 (replacing aspartic acid with glycine, D94G) and 90 (replacing alanine with valine, A90V). In MDR and treatment failure cases, resistance to FQs was most commonly associated with the D94G mutation. In contract, a high proportion of A90V mutations were observed in isolates that were newly diagnosed.

conclusionThe findings suggest that genotypic assays for FQ resistance should be carried out at the time of initial diagnosis, before starting treatment, in order to rule out mutations that impact the potential use of FQs in treatment and to control drug resistance.

Indexed as

Antitubercular AgentsDNA GyraseDNA Mutational AnalysisDrug Resistance, Multiple, BacterialFluoroquinolonesHumansMicrobial Sensitivity TestsMutationMycobacterium tuberculosisPakistanTuberculosis, Multidrug-ResistantTuberculosis, PulmonaryAntitubercular AgentsDNA GyraseFluoroquinolonesFluoroquinolone resistanceMDR and pre-XDR TBMTBDRsl assayMycobacterium tuberculosis

Identifiers

PMID32393213
PMCPMC7216623
OpenAlexW3024896231

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.