Evidence map›Paper›PMID 32392243›Full record

ArticlePLoS genetics2020

ALC1/eIF4A1-mediated regulation of CtIP mRNA stability controls DNA end resection.

Fernando Mejías-Navarro, Guillermo Rodríguez-Real, Javier Ramón, Rosa Camarillo, Pablo Huertas

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.5field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Multiple roles for PARP1 in ALC1-dependent nucleosome remodeling.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Fernando Mejías-NavarroDepartment of Genetics, University of Seville, Sevilla, Spain.ORCID 0000-0001-9543-0676
Guillermo Rodríguez-RealDepartment of Genetics, University of Seville, Sevilla, Spain.ORCID 0000-0002-2492-1619
Javier RamónDepartment of Genetics, University of Seville, Sevilla, Spain.
Rosa CamarilloDepartment of Genetics, University of Seville, Sevilla, Spain.ORCID 0000-0003-2302-7225
Pablo HuertasDepartment of Genetics, University of Seville, Sevilla, Spain.ORCID 0000-0002-1756-4449
Centro Andaluz de Biología Molecular y Medicina Regenerativa · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

During repair of DNA double-strand breaks, resection of DNA ends influences how these lesions will be repaired. If resection is activated, the break will be channeled through homologous recombination; if not, it will be simply ligated using the non-homologous end-joining machinery. Regulation of resection relies greatly on modulating CtIP, which can be done by modifying: i) its interaction partners, ii) its post-translational modifications, or iii) its cellular levels, by regulating transcription, splicing and/or protein stability/degradation. Here, we have analyzed the role of ALC1, a chromatin remodeler previously described as an integral part of the DNA damage response, in resection. Strikingly, we found that ALC1 affects resection independently of chromatin remodeling activity or its ability to bind damaged chromatin. In fact, it cooperates with the RNA-helicase eIF4A1 to help stabilize the most abundant splicing form of CtIP mRNA. This function relies on the presence of a specific RNA sequence in the 5' UTR of CtIP. Therefore, we describe an additional layer of regulation of CtIP-at the level of mRNA stability through ALC1 and eIF4A1.

Indexed as

5' Untranslated RegionsCell LineChromatinChromatin Assembly and DisassemblyDNADNA-Binding ProteinsDNA Breaks, Double-StrandedDNA End-Joining RepairDNA HelicasesEndodeoxyribonucleasesEukaryotic Initiation Factor-4AHeLa CellsHomologous RecombinationHumansNucleic Acid ConformationRNA, Messenger5' Untranslated RegionsCHD1L protein, humanChromatinDNADNA-Binding ProteinsDNA HelicasesEIF4A1 protein, humanEndodeoxyribonucleasesEukaryotic Initiation Factor-4ARBBP8 protein, humanRNA, Messenger

Identifiers

PMID32392243
PMCPMC7241833
OpenAlexW3022197969

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.