Evidence map›Paper›PMID 32391617›Full record

ArticleDevelopmental dynamics : an official publication of the American Association of Anatomists2020

miR-199 family contributes to regulation of sonic hedgehog expression during craniofacial development.

Heather A Richbourg, Diane P Hu, Yanhua Xu, Andrea J Barczak, Ralph S Marcucio

Open access · bronzeAbstract read
In one paragraph

Article in Developmental dynamics : an official publication of the American Association of Anatomists, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.8field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 12 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Article
  5. Review
  6. Article
  7. Review
  8. Article
  9. Review
  10. Frontiers in cell and developmental biology · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

Heather A RichbourgDepartment of Orthopaedic Surgery, San Francisco General Hospital, University of California, San Francisco, San Francisco, California, USA.ORCID 0000-0002-4081-1073
Diane P HuDepartment of Orthopaedic Surgery, San Francisco General Hospital, University of California, San Francisco, San Francisco, California, USA.
Yanhua XuThe MOE Key Laboratory of Biosystems Homeostasis & Protection and Innovation Center for Cell Signaling Network, Zhejiang University Life Sciences Institute, Hangzhou, China.
Andrea J BarczakFunctional Genomics Core, University of California, San Francisco, San Francisco, California, USA.
Ralph S MarcucioDepartment of Orthopaedic Surgery, San Francisco General Hospital, University of California, San Francisco, San Francisco, California, USA.ORCID 0000-0002-0537-818X
San Francisco General Hospital · USUniversity of California, San Francisco · USZhejiang University · CN

Funding

The role of continuous phenotypic variation in structural defects of the faceR01DE019638 · NIDCR · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Benedikt Hallgrimsson, Ralph S Marcucio · 2010 to 2026
$7.3M
MOLECULAR BASIS OF TISSUE INTERACTIONS THAT REGULATE CRANIOFACIAL DEVELOPMENTR01DE018234 · NIDCR · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI MARCUCIO, RALPH S · 2007 to 2017
$3.5M
Mechanisms of shape variation in a mouse model of craniofacial birth defectsF32DE028476 · NIDCR · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI RICHBOURG, HEATHER A · 2018 to 2020
$171k
NIDCR NIH HHS F32 DE028476NIDCR NIH HHS R01 DE018234NIDCR NIH HHS R01 DE019638
6 · The paper itself

Abstract

backgroundThe frontonasal ectodermal zone (FEZ) is a signaling center that regulates patterned development of the upper jaw, and Sonic hedgehog (SHH) mediates FEZ activity. Induction of SHH expression in the FEZ results from SHH-dependent signals from the brain and neural crest cells. Given the role of miRNAs in modulating gene expression, we investigated the extent to which miRNAs regulate SHH expression and FEZ signaling.

resultsIn the FEZ, the miR-199 family appears to be regulated by SHH-dependent signals from the brain; expression of this family increased from HH18 to HH22, and upon activation of SHH signaling in the brain. However, the miR-199 family is more broadly expressed in the mesenchyme of the frontonasal process and adjacent neuroepithelium. Downregulating the miR-199 genes expanded SHH expression in the FEZ, resulting in wider faces, while upregulating miR-199 genes resulted in decreased SHH expression and narrow faces. Hypoxia inducible factor 1 alpha (HIF1A) and mitogen-activated protein kinase kinase kinase 4 (MAP3K4) appear to be potential targets of miR-199b. Reduction of MAP3K4 altered beak development but increased apoptosis, while reducing HIF1A reduced expression of SHH in the FEZ and produced malformations independent of apoptosis.

conclusionsOur results demonstrate that this miRNA family appears to participate in regulating SHH expression in the FEZ; however, specific molecular mechanisms remain unknown.

Indexed as

ChickensGene Expression Regulation, DevelopmentalSignal TransductionAnimalsAvian ProteinsBody PatterningChick EmbryoEctodermFacial BonesHedgehog ProteinsMicroRNAsAvian ProteinsHedgehog ProteinsMicroRNAschickenembryologyHIF1AMAP3K4microRNASHH

Identifiers

PMID32391617
PMCPMC7484444
OpenAlexW3021874712

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.