Evidence map›Paper›PMID 32391418›Full record

ArticleMolecular & cellular oncology2020

Genomic variation as a marker of response to neoadjuvant therapy in locally advanced rectal cancer.

Jason K Douglas, Rose E Callahan, Zachary A Hothem, Craig S Cousineau, Samer Kawak, Bryan J Thibodeau, Shelli Bergeron, Wei Li, Claire E Peeples, Harry J Wasvary

Open access · bronzeAbstract read
In one paragraph

Article in Molecular & cellular oncology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed, 1 pooled it
1.4field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 1 synthesis or guideline pooled it, 15 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

Jason K DouglasDepartment of Surgery, Beaumont Health, Royal Oak, MI, USA.ORCID 0000-0003-3902-3958
Rose E CallahanDepartment of Surgical Research, Beaumont Research Institute, Royal Oak, MI, USA.ORCID 0000-0003-1156-7240
Zachary A HothemDepartment of Surgery, Beaumont Health, Royal Oak, MI, USA.ORCID 0000-0003-1994-5525
Craig S CousineauDepartment of Pathology, Beaumont Health, Royal Oak, MI, USA.ORCID 0000-0001-5336-7250
Samer KawakDepartment of Surgery, Beaumont Health, Royal Oak, MI, USA.ORCID 0000-0002-8922-7046
Bryan J ThibodeauBeaumont Biobank, Beaumont Research Institute, Royal Oak, MI, USA.ORCID 0000-0002-5559-8439
Shelli BergeronDepartment of Surgery, Beaumont Health, Royal Oak, MI, USA.ORCID 0000-0001-9442-9251
Wei LiDepartment of Pathology, Beaumont Health, Royal Oak, MI, USA.ORCID 0000-0002-9692-9820
Claire E PeeplesDepartment of Surgery, Beaumont Health, Royal Oak, MI, USA.ORCID 0000-0002-2386-7059
Harry J WasvaryDepartment of Surgery, Beaumont Health, Royal Oak, MI, USA.ORCID 0000-0003-4178-6890
Beaumont Health · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

There is variation in the responsiveness of locally advanced rectal cancer to neoadjuvant chemoradiation, from complete response to total resistance. This study compared genetic variation in rectal cancer patients who had a complete response to chemoradiation versus poor response, using tumor tissue samples sequenced with genomics analysis software. Rectal cancer patients treated with chemoradiation and proctectomy June 2006-March 2017 were grouped based on response to chemoradiation: those with no residual tumor after surgery (CR, complete responders, AJCC-CPR tumor grade 0, n = 8), and those with poor response (PR, AJCC-CPR tumor grade two or three on surgical resection, n = 8). We identified 195 variants in 83 genes in tissue specimens implicated in colorectal cancer biopathways. PR patients showed mutations in four genes not mutated in complete responders: KDM6A, ABL1, DAXX-ZBTB22, and KRAS. Ten genes were mutated only in the CR group, including ARID1A, PMS2, JAK1, CREBBP, MTOR, RB1, PRKAR1A, FBXW7, ATM C11orf65, and KMT2D, with specific discriminating variants noted in DMNT3A, KDM6A, MTOR, APC, and TP53. Although conclusions may be limited by small sample size in this pilot study, we identified multiple genetic variations in tumor DNA from rectal cancer patients who are poor responders to neoadjuvant chemoradiation, compared to complete responders.

Indexed as

biomarkerschemoradiationgenetic variationneoadjuvant treatmentRectal Cancertherapeutic response

Identifiers

PMID32391418
PMCPMC7199754
OpenAlexW3009200876

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.