Evidence map›Paper›PMID 32388590›Full record

ArticlePlant cell reports2020

Identification, characterization, and expression analysis of cowpea (Vigna unguiculata [L.] Walp.) miRNAs in response to cowpea severe mosaic virus (CPSMV) challenge.

Thiago F Martins, Pedro F N Souza, Murilo S Alves, Fredy Davi A Silva, Mariana R Arantes, Ilka M Vasconcelos, Jose T A Oliveira

Abstract read
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In one paragraph

Article in Plant cell reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
2.1field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 18 citations in OpenAlex.

  1. Application of Omics Technologies for Cowpea Improvement.Plant-environment interactions (Hoboken, N.J.) · 2026
    Review
  2. Article
  3. Review
  4. Differential expression of microRNAs in response toFrontiers in plant science · 2024
    Article
  5. Article
  6. Article
  7. Review
  8. Review
  9. Integrated Bioinformatics Analyses ofFrontiers in plant science · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Thiago F MartinsDepartment of Biochemistry and Molecular Biology, Federal University of Ceara, Fortaleza, CE, Brazil.
Pedro F N SouzaDepartment of Biochemistry and Molecular Biology, Federal University of Ceara, Fortaleza, CE, Brazil.
Murilo S AlvesDepartment of Biochemistry and Molecular Biology, Federal University of Ceara, Fortaleza, CE, Brazil.
Fredy Davi A SilvaDepartment of Biochemistry and Molecular Biology, Federal University of Ceara, Fortaleza, CE, Brazil.
Mariana R ArantesDepartment of Biochemistry and Molecular Biology, Federal University of Ceara, Fortaleza, CE, Brazil.
Ilka M VasconcelosDepartment of Biochemistry and Molecular Biology, Federal University of Ceara, Fortaleza, CE, Brazil.
Jose T A OliveiraDepartment of Biochemistry and Molecular Biology, Federal University of Ceara, Fortaleza, CE, Brazil. jtaolive@ufc.br.ORCID http://orcid.org/0000-0003-1207-1140
Universidade Federal do Ceará · BR

Funding

CAPES 306202/2017-4CAPES 431511/2016-0
6 · The paper itself

Abstract

key messageCowpea miRNAs and Argonaute genes showed differential expression patterns in response to CPSMV challenge Several biotic stresses affect cowpea production and yield. CPSMV stands out for causing severe negative impacts on cowpea. Plants have two main induced immune systems. In the basal system (PTI, PAMP-triggered immunity), plants recognize and respond to conserved molecular patterns associated with pathogens (PAMPs). The second type (ETI, Effector-triggered immunity) is induced after plant recognition of specific factors from pathogens. RNA silencing is another important defense mechanism in plants. Our research group has been using biochemical and proteomic approaches to learn which proteins and pathways are involved and could explain why some cowpea genotypes are resistant whereas others are susceptible to CPSMV. This current study was conducted to determine the role of cowpea miRNA in the interaction between a resistant cowpea genotype (BRS-Marataoã) and CPSMV. Previously identified and deposited plant microRNA sequences were used to find out all possible microRNAs in the cowpea genome. This search detected 617 mature microRNAs, which were distributed in 89 microRNA families. Next, 4 out of these 617 miRNAs and their possible target genes that encode the proteins Kat-p80, DEAD-Box, GST, and SPB9, all involved in the defense response of cowpea to CPSMV, had their expression compared between cowpea leaves uninoculated and inoculated with CPSMV. Additionally, the differential expression of genes that encode the Argonaute (AGO) proteins 1, 2, 4, 6, and 10 is reported. In summary, the studied miRNAs and AGO 2 and AGO4 associated genes showed differential expression patterns in response to CPSMV challenge, which indicate their role in cowpea defense.

Indexed as

Gene Expression Regulation, PlantBase SequenceComovirusGenome, PlantMicroRNAsNucleic Acid ConformationPlant DiseasesPlant ProteinsReference StandardsRNA StabilityVignaMicroRNAsPlant ProteinsCowpeaCPSMVDefense mechanismMicroRNAs

Identifiers

PMID32388590
OpenAlexW3022410017

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.