ArticleCell2020
A Paleogenomic Reconstruction of the Deep Population History of the Andes.
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Article in Cell, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 55 papers.
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55 citing papers in PubMed.
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- Unraveling the genetic landscape and admixture dynamics of urban populations across Peru.Communications biology · 2026Article
- Subsistence transition preceded population turnover in the eastern Colombian Andes.bioRxiv : the preprint server for biology · 2026Article
- Ribcage Morphology in Native South American Populations From Different Altitudes: Insights From a Global Comparative Framework.American journal of human biology : the official journal of the Human Biology Council · 2026Article
- Global patterns of natural selection inferred using ancient DNA.bioRxiv : the preprint server for biology · 2026Article
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- Human population history on the North Coast of peru from Y chromosomes and mitogenomes.Scientific reports · 2025Article
- Ancient dog mitogenomes support the dual dispersal of dogs and agriculture into South America.Proceedings. Biological sciences · 2025Article
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- A 6000-year-long genomic transect from the Bogotá Altiplano reveals multiple genetic shifts in the demographic history of Colombia.Science advances · 2025Article
- Urbanization and genetic homogenization in the medieval Low Countries revealed through a ten-century paleogenomic study of the city of Sint-Truiden.Genome biology · 2025Article
- Signatures of natural selection may indicate a genetic basis for the beneficial effects of oily fish intake in indigenous people from coastal Ecuador.G3 (Bethesda, Md.) · 2025Article
- Peruvian Population Genomics: Unraveling the Genetic Landscape and Admixture Dynamics of Urban Populations.bioRxiv : the preprint server for biology · 2025Article
- Family relations of Moche elite burials on the North Coast of Peru (~500 CE): Analyses of the Señora de Cao and relatives.Proceedings of the National Academy of Sciences of the United States of America · 2025Article
- The peruvian genome project: expanding the global pool of genome diversity from South America.Frontiers in genetics · 2025Article
- Variable heteroplasmy of the Common 9-bp Deletion in the Human Mitochondrial Genome in Ancient and Present-Day Populations.microPublication biology · 2025Article
- The Genomic and Cultural Diversity of the Inka Qhapaq Hucha Ceremony in Chile and Argentina.Genome biology and evolution · 2024Article
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Authors and funding
50 authors.
Nathan NakatsukaDepartment of Genetics, Harvard Medical School, Boston, Massachusetts 02115, USA; Harvard-MIT Division of Health Sciences and Technology, Boston, MA 02115, USA. Electronic address: nathan_nakatsuka@hms.harvard.edu.
Iosif LazaridisDepartment of Genetics, Harvard Medical School, Boston, Massachusetts 02115, USA.
Chiara BarbieriMax Planck Institute for the Science of Human History, Jena 07745, Germany; Department of Evolutionary Biology and Environmental Studies, University of Zurich, Zurich 8057, Switzerland.
Pontus SkoglundFrancis Crick Institute, London NW1 1AT, UK.
Nadin RohlandDepartment of Genetics, Harvard Medical School, Boston, Massachusetts 02115, USA.
Swapan MallickDepartment of Genetics, Harvard Medical School, Boston, Massachusetts 02115, USA; Howard Hughes Medical Institute, Harvard Medical School, Boston, MA 02446, USA; Broad Institute of Harvard and MIT, Cambridge, MA 02142, USA.
Cosimo PosthMax Planck Institute for the Science of Human History, Jena 07745, Germany.
Kelly Harkins-KinkaidUCSC Paleogenomics, University of California, Santa Cruz, Santa Cruz, CA 95064, USA.
Matthew FerryDepartment of Genetics, Harvard Medical School, Boston, Massachusetts 02115, USA; Howard Hughes Medical Institute, Harvard Medical School, Boston, MA 02446, USA.
Éadaoin HarneyDepartment of Genetics, Harvard Medical School, Boston, Massachusetts 02115, USA; Howard Hughes Medical Institute, Harvard Medical School, Boston, MA 02446, USA.
Megan MichelDepartment of Genetics, Harvard Medical School, Boston, Massachusetts 02115, USA; Howard Hughes Medical Institute, Harvard Medical School, Boston, MA 02446, USA.
Kristin StewardsonDepartment of Genetics, Harvard Medical School, Boston, Massachusetts 02115, USA; Howard Hughes Medical Institute, Harvard Medical School, Boston, MA 02446, USA.
Jannine Novak-ForstUCSC Paleogenomics, University of California, Santa Cruz, Santa Cruz, CA 95064, USA.
José M CaprilesDepartment of Anthropology, The Pennsylvania State University, University Park, PA 16802, USA.
Marta Alfonso DurrutyDepartment of Sociology, Anthropology and Social Work, Kansas State University, Manhattan, KS 66506, USA.
Karina Aranda ÁlvarezSociedad de Arqueología de La Paz, 5294 La Paz, Bolivia.
David Beresford-JonesMcDonald Institute for Archaeological Research, University of Cambridge, Downing St., Cambridge, CB2 3ER, UK.
Richard BurgerDepartment of Anthropology, Yale University, New Haven, CT 06511, USA.
Lauren CadwalladerOffice of Scholarly Communication, Cambridge University Library, Cambridge CB3 9DR, UK.
Ricardo FujitaCentro de Genética y Biología Molecular, Facultdad de Medicina, Universidad de San Martín de Porres, Lima 15011, Peru.
Johny IslaPeruvian Ministry of Culture, DDC Ica, Directos of the Nasca-Palpa Management Plan, Calle Juan Matta 880, Nasca 11401, Peru.
George LauSainsbury Research Unit, University of East Anglia, Norwich Research Park, Norwich NR4 7TJ, UK.
Carlos Lémuz AguirreCarrera de Arqueología, Universidad Mayor de San Andrés, Edificio Facultad de Ciencias Sociales 3er Piso, La Paz 1995, Bolivia.
Steven LeBlancHarvard Peabody Museum, Harvard University, Cambridge, MA 02138, USA.
Sergio Calla MaldonadoCarrera de Arqueología, Universidad Mayor de San Andrés, Edificio Facultad de Ciencias Sociales 3er Piso, La Paz 1995, Bolivia.
Frank MeddensSchool of Archaeology, Geography and Environmental Sciences, University of Reading, Reading, Berkshire, RG6 6AH, UK.
Pablo G MessineoINCUAPA-CONICET, Facultad de Ciencias Sociales, Universidad Nacional del Centro de la Provincia de Buenos Aires, Olavarría 7400, Argentina.
Brendan J CulletonInstitutes for Energy and the Environment, The Pennsylvania State University, University Park, PA 16802, USA.
Thomas K HarperDepartment of Anthropology, The Pennsylvania State University, University Park, PA 16802, USA.
Jeffrey QuilterHarvard Peabody Museum, Harvard University, Cambridge, MA 02138, USA.
Gustavo PolitisINCUAPA-CONICET, Facultad de Ciencias Sociales, Universidad Nacional del Centro de la Provincia de Buenos Aires, Olavarría 7400, Argentina.
Kurt RademakerDepartment of Anthropology, Michigan State University, East Lansing, MI 48824, USA.
Markus ReindelCommission for Archaeology of Non-European Cultures, German Archaeological Institute, Berlin 14195, Germany.
Mario RiveraUniversidad de Magallanes, Punta Arenas 6210427, Chile; Field Museum Natural History 1400 S Lake Shore Dr., Chicago, IL 60605, USA.
Lucy SalazarMcDonald Institute for Archaeological Research, University of Cambridge, Downing St., Cambridge, CB2 3ER, UK.
José R SandovalCentro de Genética y Biología Molecular, Facultdad de Medicina, Universidad de San Martín de Porres, Lima 15011, Peru.
Calogero M SantoroInstituto de Alta Investigation, Universidad de Tarapaca, Antafogasta 1520, Arica, 1000000, Chile.
Nahuel ScheiflerINCUAPA-CONICET, Facultad de Ciencias Sociales, Universidad Nacional del Centro de la Provincia de Buenos Aires, Olavarría 7400, Argentina.
Vivien StandenDepartamento de Antropología, Universidad de Tarapacá, Antafogasta 1520, Arica, 1000000, Chile.
Maria Ines BarretoMuseo de Sitio Huaca Pucllana, Calle General Borgoño, Cuadra 8, Miraflores, Lima 18, Peru.
Isabel Flores EspinozaMuseo de Sitio Huaca Pucllana, Calle General Borgoño, Cuadra 8, Miraflores, Lima 18, Peru.
Elsa Tomasto-CagigaoDepartment of Humanities, Pontifical Catholic University of Peru, San Miguel 15088, Peru.
Guido ValverdeAustralian Centre for Ancient DNA, School of Biological Sciences and The Environment Institute, Adelaide University, Adelaide, SA 5005, Australia.
Douglas J KennettInstitutes for Energy and the Environment, The Pennsylvania State University, University Park, PA 16802, USA; Department of Anthropology, The Pennsylvania State University, University Park, PA 16802, USA; Department of Anthropology, University of California, Santa Barbara, Santa Barbara, CA 93106, USA.
Alan CooperAustralian Centre for Ancient DNA, School of Biological Sciences and The Environment Institute, Adelaide University, Adelaide, SA 5005, Australia.
Johannes KrauseMax Planck Institute for the Science of Human History, Jena 07745, Germany.
Wolfgang HaakMax Planck Institute for the Science of Human History, Jena 07745, Germany.
Bastien LlamasAustralian Centre for Ancient DNA, School of Biological Sciences and The Environment Institute, Adelaide University, Adelaide, SA 5005, Australia.
David ReichDepartment of Genetics, Harvard Medical School, Boston, Massachusetts 02115, USA; Howard Hughes Medical Institute, Harvard Medical School, Boston, MA 02446, USA; Broad Institute of Harvard and MIT, Cambridge, MA 02142, USA; Department of Human Evolutionary Biology, Harvard University, Cambridge, MA 02138, USA. Electronic address: reich@genetics.med.harvard.edu.
Lars Fehren-SchmitzUCSC Paleogenomics, University of California, Santa Cruz, Santa Cruz, CA 95064, USA; UCSC Genomics Institute, University of California, Santa Cruz, Santa Cruz, CA 95064, USA. Electronic address: lfehrens@ucsc.edu.
Funding
Medical Scientist Training ProgramT32GM007753 · NIGMS · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI WALENSKY, LOREN DAVID · 1985 to 2021
$50.0MPopulation mixture in evolutionary and medical geneticsR01GM100233 · NIGMS · HARVARD MEDICAL SCHOOL · PI PATTERSON, NICK J, REICH, DAVID E · 2012 to 2019
$2.7MCancer Research UKHoward Hughes Medical InstituteMedical Research CouncilNIGMS NIH HHS R01 GM100233NIGMS NIH HHS T32 GM007753Wellcome Trust FC001595
Abstract
There are many unanswered questions about the population history of the Central and South Central Andes, particularly regarding the impact of large-scale societies, such as the Moche, Wari, Tiwanaku, and Inca. We assembled genome-wide data on 89 individuals dating from ∼9,000-500 years ago (BP), with a particular focus on the period of the rise and fall of state societies. Today's genetic structure began to develop by 5,800 BP, followed by bi-directional gene flow between the North and South Highlands, and between the Highlands and Coast. We detect minimal admixture among neighboring groups between ∼2,000-500 BP, although we do detect cosmopolitanism (people of diverse ancestries living side-by-side) in the heartlands of the Tiwanaku and Inca polities. We also highlight cases of long-range mobility connecting the Andes to Argentina and the Northwest Andes to the Amazon Basin. VIDEO ABSTRACT.
Indexed as
AnthropologyCentral AmericaDNA, AncientDNA, MitochondrialGene FlowGenetics, PopulationHaplotypesHumansSequence Analysis, DNASouth AmericaDNA, AncientDNA, Mitochondrialancient DNAAndesanthropologyarchaeologypopulation genetics
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