Evidence map›Paper›PMID 32385381›Full record

ArticleScientific reports2020

Label-free plasma proteomics identifies haptoglobin-related protein as candidate marker of idiopathic pulmonary fibrosis and dysregulation of complement and oxidative pathways.

Mayank Saraswat, Sakari Joenväärä, Tiialotta Tohmola, Eva Sutinen, Ville Vartiainen, Katri Koli, Marjukka Myllärniemi, Risto Renkonen

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed, 1 pooled it
1.6field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 1 synthesis or guideline pooled it, 22 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Identification of IPF specific genes expressed by lung tissue-derived fibroblasts using next generation sequencing.Sarcoidosis, vasculitis, and diffuse lung diseases : official journal of WASOG · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Mayank SaraswatTransplantation Laboratory, Faculty of Medicine, University of Helsinki, Helsinki, Finland. sarawat.mk@gmail.com.
Sakari JoenvääräTransplantation Laboratory, Faculty of Medicine, University of Helsinki, Helsinki, Finland.
Tiialotta TohmolaTransplantation Laboratory, Faculty of Medicine, University of Helsinki, Helsinki, Finland.
Eva SutinenDepartment of Pulmonary Medicine, Heart and Lung Center, Helsinki University Hospital, Helsinki, Finland.
Ville VartiainenDepartment of Pulmonary Medicine, Heart and Lung Center, Helsinki University Hospital, Helsinki, Finland.
Katri KoliIndividualized Drug Therapy Research Program, Faculty of Medicine, University of Helsinki, Helsinki, Finland.
Marjukka MyllärniemiDepartment of Pulmonary Medicine, Heart and Lung Center, Helsinki University Hospital, Helsinki, Finland.
Risto RenkonenTransplantation Laboratory, Faculty of Medicine, University of Helsinki, Helsinki, Finland.
Helsinki University Hospital · FIUniversity of Helsinki · FI

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Idiopathic pulmonary fibrosis (IPF) is a lung parenchymal disease of unknown cause usually occurring in older adults. It is a chronic and progressive condition with poor prognosis and diagnosis is largely clinical. Currently, there exist few biomarkers that can predict patient outcome or response to therapies. Together with lack of markers, the need for novel markers for the detection and monitoring of IPF, is paramount. We have performed label-free plasma proteomics of thirty six individuals, 17 of which had confirmed IPF. Proteomics data was analyzed by volcano plot, hierarchical clustering, Partial-least square discriminant analysis (PLS-DA) and Ingenuity pathway analysis. Univariate and multivariate statistical analysis overlap identified haptoglobin-related protein as a possible marker of IPF when compared to control samples (Area under the curve 0.851, ROC-analysis). LXR/RXR activation and complement activation pathways were enriched in t-test significant proteins and oxidative regulators, complement proteins and protease inhibitors were enriched in PLS-DA significant proteins. Our pilot study points towards aberrations in complement activation and oxidative damage in IPF patients and provides haptoglobin-related protein as a new candidate biomarker of IPF.

Indexed as

Blood ProteinsOxidative StressProteomicsSignal TransductionAgedBiomarkersCase-Control StudiesComplement System ProteinsComputational BiologyFemaleHaptoglobinsHumansIdiopathic Pulmonary FibrosisMaleProteomeROC CurveBiomarkersBlood ProteinsComplement System ProteinsHaptoglobinsProteome

Identifiers

PMID32385381
PMCPMC7211010
OpenAlexW3020847709

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.