Evidence map›Paper›PMID 32385268›Full record

ArticleNature communications2020

Epigenome environment interactions accelerate epigenomic aging and unlock metabolically restricted epigenetic reprogramming in adulthood.

Lindsey S Treviño, Jianrong Dong, Ahkilesh Kaushal, Tiffany A Katz, Rahul Kumar Jangid, Matthew J Robertson, Sandra L Grimm, Chandra Shekar R Ambati, Vasanta Putluri, Aaron R Cox and 9 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 46 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
46citing papers in PubMed, 1 pooled it
14.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

46 citing papers in PubMed, 1 synthesis or guideline pooled it, 59 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Review
  4. Article
  5. Distinct molecular responses of human intestinal organoids to proton and photon radiation.American journal of physiology. Gastrointestinal and liver physiology · 2025
    Article
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  16. Article
  17. NNanotoxicology · 2023
    Article
  18. Article
  19. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 1 institution in 1 country.

Lindsey S Treviño *Center for Precision Environmental Health, Baylor College of Medicine, Houston, TX, 77030, USA.ORCID http://orcid.org/0000-0003-3810-4895
Jianrong Dong *Department of Molecular and Cellular Biology, Baylor College of Medicine, Houston, TX, 77030, USA.ORCID http://orcid.org/0000-0001-5368-2787
Ahkilesh KaushalCenter for Precision Environmental Health, Baylor College of Medicine, Houston, TX, 77030, USA.
Tiffany A KatzCenter for Precision Environmental Health, Baylor College of Medicine, Houston, TX, 77030, USA.
Rahul Kumar JangidCenter for Precision Environmental Health, Baylor College of Medicine, Houston, TX, 77030, USA.
Matthew J RobertsonAdvanced Technology Cores, Baylor College of Medicine, Houston, TX, 77030, USA.
Sandra L GrimmAdvanced Technology Cores, Baylor College of Medicine, Houston, TX, 77030, USA.
Chandra Shekar R AmbatiDepartment of Molecular and Cellular Biology, Baylor College of Medicine, Houston, TX, 77030, USA.
Vasanta PutluriAdvanced Technology Cores, Baylor College of Medicine, Houston, TX, 77030, USA.
Aaron R CoxDepartment of Medicine, Baylor College of Medicine, Houston, TX, 77030, USA.ORCID http://orcid.org/0000-0002-3330-5746
Kang Ho KimDepartment of Molecular and Cellular Biology, Baylor College of Medicine, Houston, TX, 77030, USA.
Thaddeus D MayDepartment of Pediatrics, Baylor College of Medicine, Houston, TX, 77030, USA.
Morgan R GalloCenter for Precision Environmental Health, Baylor College of Medicine, Houston, TX, 77030, USA.
David D MooreDepartment of Molecular and Cellular Biology, Baylor College of Medicine, Houston, TX, 77030, USA.ORCID http://orcid.org/0000-0002-5151-9748
Sean M HartigDepartment of Molecular and Cellular Biology, Baylor College of Medicine, Houston, TX, 77030, USA.
Charles E FouldsCenter for Precision Environmental Health, Baylor College of Medicine, Houston, TX, 77030, USA.
Nagireddy PutluriDepartment of Molecular and Cellular Biology, Baylor College of Medicine, Houston, TX, 77030, USA.
Cristian CoarfaCenter for Precision Environmental Health, Baylor College of Medicine, Houston, TX, 77030, USA. coarfa@bcm.edu.ORCID http://orcid.org/0000-0002-4183-4939
Cheryl Lyn WalkerCenter for Precision Environmental Health, Baylor College of Medicine, Houston, TX, 77030, USA. cheryl.walker@bcm.edu.
Baylor College of Medicine · US

Funding

Tumor BiologyP30CA125123 · NCI · BAYLOR COLLEGE OF MEDICINE · PI Michael M Ittmann · 2007 to 2026
$73.9M
Translational Research Support CoreP30ES030285 · NIEHS · BAYLOR COLLEGE OF MEDICINE · PI Casey W Wright · 2019 to 2026
$14.7M
EXPANSION OF NURSA TRANSCRIPTOMINE ANNOTATIONU24DK097748 · NIDDK · BAYLOR COLLEGE OF MEDICINE · PI EVANS, RONALD M, MCKENNA, NEIL · 2012 to 2017
$9.2M
METABOLIC IMPACTS OF TYPE II INTERFERON SIGNALS IN OBESITYR01DK114356 · NIDDK · BAYLOR COLLEGE OF MEDICINE · PI HARTIG, SEAN · 2017 to 2025
$4.6M
Epigenetic Signatures of Developmental Reprogramming in Target and Surrogate TissuesU01ES026719 · NIEHS · TEXAS A&M UNIVERSITY HEALTH SCIENCE CTR · PI BARTOLOMEI, MARISA S., WALKER, CHERYL L. · 2016 to 2020
$3.4M
Epigenetic Programmers Targeted During Developmental ReprogrammingR01ES023206 · NIEHS · TEXAS A&M UNIVERSITY HEALTH SCIENCE CTR · PI BEDFORD, MARK T., MANCINI, MICHAEL A. · 2013 to 2016
$2.3M
NCI NIH HHS P30 CA125123NIDDK NIH HHS R01 DK114356NIDDK NIH HHS U24 DK097748NIEHS NIH HHS P30 ES030285NIEHS NIH HHS R01 ES023206NIEHS NIH HHS U01 ES026719
6 · The paper itself

Abstract

Our early-life environment has a profound influence on developing organs that impacts metabolic function and determines disease susceptibility across the life-course. Using a rat model for exposure to an endocrine disrupting chemical (EDC), we show that early-life chemical exposure causes metabolic dysfunction in adulthood and reprograms histone marks in the developing liver to accelerate acquisition of an adult epigenomic signature. This epigenomic reprogramming persists long after the initial exposure, but many reprogrammed genes remain transcriptionally silent with their impact on metabolism not revealed until a later life exposure to a Western-style diet. Diet-dependent metabolic disruption was largely driven by reprogramming of the Early Growth Response 1 (EGR1) transcriptome and production of metabolites in pathways linked to cholesterol, lipid and one-carbon metabolism. These findings demonstrate the importance of epigenome:environment interactions, which early in life accelerate epigenomic aging, and later in adulthood unlock metabolically restricted epigenetic reprogramming to drive metabolic dysfunction.

Indexed as

AnimalsDNA MethylationEarly Growth Response Protein 1Endocrine DisruptorsEpigenesis, GeneticEpigenomeEpigenomicsFemaleGene-Environment InteractionGenome-Wide Association StudyMaleRatsEarly Growth Response Protein 1Egr1 protein, ratEndocrine Disruptors

Identifiers

PMID32385268
PMCPMC7210260
OpenAlexW3023988920

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.