Evidence map›Paper›PMID 32385154›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2020

RNA-binding motifs of hnRNP K are critical for induction of antibody diversification by activation-induced cytidine deaminase.

Ziwei Yin, Maki Kobayashi, Wenjun Hu, Koichi Higashi, Nasim A Begum, Ken Kurokawa, Tasuku Honjo

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
0.7field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 17 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Hnrnpk protects against osteoarthritis through targeting WWC1 mRNA and inhibiting Hippo signaling pathway.Molecular therapy : the journal of the American Society of Gene Therapy · 2024
    Article
  8. Post-transcriptional checkpoints in autoimmunity.Nature reviews. Rheumatology · 2023
    Review
  9. Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  10. Review
  11. Article
  12. RNA-binding motifs of hnRNP K are critical for induction of antibody diversification by activation-induced cytidine deaminase.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Ziwei YinDepartment of Immunology and Genomic Medicine, Graduate School of Medicine, Kyoto University, 606-8501 Kyoto, Japan.ORCID 0000-0002-1672-0569
Maki KobayashiDepartment of Immunology and Genomic Medicine, Graduate School of Medicine, Kyoto University, 606-8501 Kyoto, Japan.ORCID 0000-0001-7668-3926
Wenjun HuDepartment of Immunology and Genomic Medicine, Graduate School of Medicine, Kyoto University, 606-8501 Kyoto, Japan.
Koichi HigashiCenter for Information Biology, National Institute of Genetics, Mishima, 411-8540 Shizuoka, Japan.ORCID 0000-0002-8970-2652
Nasim A BegumDepartment of Immunology and Genomic Medicine, Graduate School of Medicine, Kyoto University, 606-8501 Kyoto, Japan.ORCID 0000-0001-7177-188X
Ken KurokawaCenter for Information Biology, National Institute of Genetics, Mishima, 411-8540 Shizuoka, Japan.ORCID 0000-0001-8662-9958
Tasuku HonjoDepartment of Immunology and Genomic Medicine, Graduate School of Medicine, Kyoto University, 606-8501 Kyoto, Japan; honjo@mfour.med.kyoto-u.ac.jp.ORCID 0000-0003-2300-3928
Kyoto University · JPNational Institute of Genetics · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Activation-induced cytidine deaminase (AID) is the key enzyme for class switch recombination (CSR) and somatic hypermutation (SHM) to generate antibody memory. Previously, heterogeneous nuclear ribonucleoprotein K (hnRNP K) was shown to be required for AID-dependent DNA breaks. Here, we defined the function of major RNA-binding motifs of hnRNP K, GXXGs and RGGs in the K-homology (KH) and the K-protein-interaction (KI) domains, respectively. Mutation of GXXG, RGG, or both impaired CSR, SHM, and

Indexed as

AntibodiesCytidine DeaminaseDNA BreaksHeterogeneous-Nuclear Ribonucleoprotein KAICDA (Activation-Induced Cytidine Deaminase)AnimalsHumansImmunoglobulin Class SwitchingImmunoglobulin Heavy ChainsMiceRNA-Binding MotifsSomatic Hypermutation, ImmunoglobulinAICDA (Activation-Induced Cytidine Deaminase)AntibodiesCytidine DeaminaseHeterogeneous-Nuclear Ribonucleoprotein KImmunoglobulin Heavy Chainsactivation-induced cytidine deaminaseDNA breaksheterogeneous nuclear ribonucleoprotein KIgHRNA-binding motifs

Identifiers

PMID32385154
PMCPMC7261133
OpenAlexW3022737910

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.