Evidence map›Paper›PMID 32383051›Full record

ArticleJournal of molecular modeling2020

Understanding thermal and organic solvent stability of thermoalkalophilic lipases: insights from computational predictions and experiments.

Mohamed Shehata, Emel Timucin, Alessandro Venturini, Osman Uğur Sezerman

Abstract read
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In one paragraph

Article in Journal of molecular modeling, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.3field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 27 citations in OpenAlex.

  1. Review
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  4. Construction and utilization of FeComputational and structural biotechnology journal · 2025
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  11. Ethanol as additive enhance the performance of immobilized lipase LipA fromBiotechnology reports (Amsterdam, Netherlands) · 2021
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 2 countries.

Mohamed ShehataInstitute of Health Science, Department of Medical Biotechnology, Acibadem Mehmet Ali Aydınlar University, Atasehir, Istanbul, Turkey. mohamed.gyte@gmail.com.ORCID http://orcid.org/0000-0003-0841-4577
Emel TimucinDepartment of Biostatistics and Medical Informatics, School of Medicine, Acibadem Mehmet Ali Aydınlar University, Atasehir, Istanbul, Turkey.
Alessandro VenturiniInstitute of Organic Synthesis and Photoreactivity, National Research Council of Italy, Via P. Gobetti 101, 40129, Bologna, Italy.
Osman Uğur SezermanDepartment of Biostatistics and Medical Informatics, School of Medicine, Acibadem Mehmet Ali Aydınlar University, Atasehir, Istanbul, Turkey.
Kent Hastanesi · TRAcıbadem University · TRInstitute of Organic Synthesis and Photoreactivity · IT

Funding

Türkiye Bilimsel ve Teknolojik Araştirma Kurumu (TR) 215Z712
6 · The paper itself

Abstract

Bacillus thermocatenulatus lipase (BTL2), a member of the isolated lipase family known as thermoalkalophilic lipases, carries potential for industrial applications owing to its ability to catalyze versatile reactions under extreme conditions. This study investigates the molecular effects of distinct solvents on the stability of BTL2 at different temperatures, aiming to contribute to lipase use in industrial applications. Initially, molecular dynamic (MD) simulations were carried out to address for the molecular impacts of distinct solvents on the structural stability of BTL2 at different temperatures. Two lipase conformations representing the active and inactive forms were simulated in 5 solvents including water, ethanol, methanol, cyclohexane, and toluene. Low temperature simulations showed that polar solvents led to enhanced lid fluctuations compared with non-polar solvents reflecting a more dynamic equilibrium between active and inactive lipase conformations in polar solvents including water, while the overall structure of the lipase in both forms became more rigid in non-polar solvents than they were in polar solvent. Notably, the native lipase fold was maintained in non-polar solvents even at high temperatures, indicating an enhancement of lipase's thermostability in non-polar organic solvents. Next, we conducted experiments for which BTL2 was expressed in a heterologous host and purified to homogeneity, and its thermostability in different solvents was assessed. Parallel to the computational findings, experimental results suggested that non-polar organic solvents contributed to BTL2's thermostability at concentrations as high as 70% (v/v). Altogether, this study provides beneficial insights to the lipase use under extreme conditions. Graphical Abstract.

Indexed as

Molecular Dynamics SimulationTemperature2-PropanolAcetoneBacterial ProteinsCatalytic DomainCyclohexanesEnzyme StabilityEthanolGeobacillusHymecromoneLipaseMethanolProtein ConformationSolventsToluene2-Propanol4-methylumbelliferyl butyrateAcetoneBacterial ProteinsCyclohexaneCyclohexanesEthanolHymecromoneLipaseMethanolSolventsTolueneBiocatalysisMolecular dynamic simulationsOrganic solvent stabilityThermoalkalophilic lipasesThermostability

Identifiers

PMID32383051
OpenAlexW3023697977

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.