Evidence map›Paper›PMID 32382396›Full record

ArticleComputational and structural biotechnology journal2020

Utility of clinical exome sequencing in a complex Emirati pediatric cohort.

Nour Abu Mahfouz, Praseetha Kizhakkedath, Alia Ibrahim, Maha El Naofal, Sathishkumar Ramaswamy, Divinlal Harilal, Yasmeen Qutub, Mohammed Uddin, Alan Taylor, Zeinab Alloub and 4 more

Abstract read
In one paragraph

Article in Computational and structural biotechnology journal, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Nour Abu MahfouzCollege of Medicine, Mohammed Bin Rashid University of Medicine and Health Sciences, Dubai, United Arab Emirates.
Praseetha KizhakkedathGenomics Center, Al Jalila Children's Specialty Hospital, Dubai, United Arab Emirates.
Alia IbrahimRoyal College of Surgeons in Ireland, Ireland.
Maha El NaofalGenomics Center, Al Jalila Children's Specialty Hospital, Dubai, United Arab Emirates.
Sathishkumar RamaswamyGenomics Center, Al Jalila Children's Specialty Hospital, Dubai, United Arab Emirates.
Divinlal HarilalGenomics Center, Al Jalila Children's Specialty Hospital, Dubai, United Arab Emirates.
Yasmeen QutubGenomics Center, Al Jalila Children's Specialty Hospital, Dubai, United Arab Emirates.
Mohammed UddinCollege of Medicine, Mohammed Bin Rashid University of Medicine and Health Sciences, Dubai, United Arab Emirates.
Alan TaylorGenomics Center, Al Jalila Children's Specialty Hospital, Dubai, United Arab Emirates.
Zeinab AlloubNeurodevelopment Department, Ireland.
Ammar AlBannaCollege of Medicine, Mohammed Bin Rashid University of Medicine and Health Sciences, Dubai, United Arab Emirates.
Walid AbuhammourInfection Control Department, Ireland.
Basil FathallaRheumatology Department, Al Jalila Children's Specialty Hospital, Dubai, United Arab Emirates.
Ahmad Abou TayounCollege of Medicine, Mohammed Bin Rashid University of Medicine and Health Sciences, Dubai, United Arab Emirates.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Clinical exome sequencing (CES) has become a routine diagnostic tool in several pediatric subspecialties, with a reported average diagnostic yield of ~25% in this patient poulation. The utility of CES in the United Arab Emirates (UAE) has not been previously investigated, most likely due to the lack of the appropriate tertiary pediatric centers and diagnostic genomic facilities in this country. Here, we report, for the first time, CES findings on a multispecialty pediatric cohort in the UAE (N = 51). This cohort, which was mostly Emirati (86%; 44/51), was followed at Al Jalila Children's Hospital (AJCH), the first and only dedicated tertiary pediatric center in the country. CES demonstrates a high diagnostic yield (41%; 21/51) in this cohort, where 55% (28/51) had previous non-diagnostic genetic testing while for the remaining individuals (45%), CES was the first-tier test. Given the reported high consanguinity rate in this population, 48% of the positive cases (10/21) were due to genes associated with recessive conditions. However, 11 out of 21 positive cases (52%) were due to heterozygous pathogenic variants in genes known to cause dominantly inherited disorders, including a case with a dual diagnosis attributed to two different genes (2%; 1/51), and another case with a novel

Indexed as

ASD, Autism Spectrum DisordersClinical exome sequencingDD, Developmental delayDiagnostic yieldID, Intellectual disabilityMCA, Multiple Congenital AbnormalitiesPediatricWES

Identifiers

PMID32382396
PMCPMC7200174

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.