Evidence map›Paper›PMID 32382253›Full record

ArticleJournal of biomolecular techniques : JBT2020

Bioinformatics Core Survey Highlights the Challenges Facing Data Analysis Facilities.

Julie A Dragon, Chris Gates, Shannan Ho Sui, John N Hutchinson, R Krishna Murthy Karuturi, Alper Kucukural, Shawn Polson, Alberto Riva, Matthew Lee Settles, Jyothi Thimmapuram and 1 more

Abstract read
In one paragraph

Article in Journal of biomolecular techniques : JBT, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

  1. Article
  2. Embedding FAIR Data Practices in Shared Core Resource Facilities.Journal of biomolecular techniques : JBT · 2026
    Review
  3. Article
  4. Article
  5. Review
  6. Review
  7. Article
  8. Article
  9. A postdoctoral training program in bioimage analysis.Molecular biology of the cell · 2024
    Review
  10. A Postdoctoral Training Program in Bioimage Analysis.bioRxiv : the preprint server for biology · 2024
    Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Julie A DragonUniversity of Vermont, Burlington, Vermont 05405, USA.
Chris GatesUniversity of Michigan, Ann Arbor, Michigan 48109, USA.
Shannan Ho SuiHarvard University, Cambridge, Massachusetts 02138, USA.
John N HutchinsonHarvard University, Cambridge, Massachusetts 02138, USA.
R Krishna Murthy KaruturiThe Jackson Laboratory for Genomic Medicine, Farmington, Connecticut 06032, USA.
Alper KucukuralUniversity of Massachusetts Medical School, Worcester, Massachusetts 01605, USA.
Shawn PolsonUniversity of Delaware, Newark, Delaware 19716, USA.
Alberto RivaUniversity of Florida, Gainesville, Florida 32611, USA.
Matthew Lee SettlesUniversity of California at Davis, Davis, California 95616, USA.
Jyothi ThimmapuramPurdue University, West Lafayette, Indiana 47907, USA; and.
Stuart S LevineMassachusetts Institute of Technology, Cambridge, Massachusetts 02139, USA.

Funding

VIRUS PRODUCTION COREP30CA014051 · NCI · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI Michael Birnbaum · 1985 to 2026
$93.9M
Predictive Modeling & Optimal Control Framework for Model-Based Epidemic Response in DelawareP20GM103446 · NIGMS · UNIVERSITY OF DELAWARE · PI Shawn W Polson · 2012 to 2026
$67.2M
Understanding Factors Influencing COVID-19 Testing and Vaccination in Immigrant Low-income and Homeless Populations and Testing Targeted InterventionsU54GM115516 · NIGMS · MAINEHEALTH · PI Frances E. Carr · 2017 to 2026
$51.6M
University of Massachusetts Center for Clinical Science and Translational SupplementUL1TR001453 · NCATS · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI LUZURIAGA, KATHERINE F · 2015 to 2024
$39.0M
SUBSTRATE SPECIFICITY OF THE BER OXIDATIVE DNA GLYCOSYLASESP01CA098993 · NCI · UNIVERSITY OF VERMONT &ST AGRIC COLLEGE · PI LEE, ANDREA J · 2004 to 2021
$25.9M
TOXICOLOGY CORE UNITP30ES002109 · NIEHS · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI NILES, JACQUIN C · 1985 to 2020
$25.6M
Using Dengue Controlled Human Infection Model to Identify Adaptive Immune Correlates of ProtectionP20GM125498 · NIGMS · UNIVERSITY OF VERMONT & ST AGRIC COLLEGE · PI Beth Diane Kirkpatrick · 2018 to 2026
$24.9M
Vermont Immunology/Infectious Diseases CenterP30GM118228 · NIGMS · UNIVERSITY OF VERMONT & ST AGRIC COLLEGE · PI BUDD, RALPH C · 2016 to 2021
$6.8M
Vermont Breast Cancer Molecular Characterization LaboratoryU01CA196383 · NCI · UNIVERSITY OF VERMONT & ST AGRIC COLLEGE · PI SPRAGUE, BRIAN L, STEIN, JANET L · 2015 to 2020
$5.4M
NCATS NIH HHS UL1 TR001453NCI NIH HHS P01 CA098993NCI NIH HHS P30 CA014051NCI NIH HHS U01 CA196383NIEHS NIH HHS P30 ES002109NIGMS NIH HHS P20 GM103446NIGMS NIH HHS P20 GM125498NIGMS NIH HHS P30 GM118228NIGMS NIH HHS U54 GM115516
6 · The paper itself

Abstract

Over the last decade, the cost of -omics data creation has decreased 10-fold, whereas the need for analytical support for those data has increased exponentially. Consequently, bioinformaticians face a second wave of challenges: novel applications of existing approaches (

Indexed as

Biomedical ResearchComputational BiologyGenomicsHumansSingle-Cell AnalysisABRFfunding modelinstitutional supportomics

Identifiers

PMID32382253
PMCPMC7192196

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.