Evidence map›Paper›PMID 32382052›Full record

ArticleNature communications2020

Damped circadian oscillation in the absence of KaiA in Synechococcus.

Naohiro Kawamoto, Hiroshi Ito, Isao T Tokuda, Hideo Iwasaki

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 44 citations in OpenAlex.

  1. Intrinsic period stability of the cyanobacterial circadian oscillator across in vitro and in vivo conditions.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  2. Anoxia-adapted cyanobacteria in a marine blue hole.Applied and environmental microbiology · 2026
    Article
  3. Article
  4. Review
  5. Article
  6. Frontiers in cell and developmental biology · 2025
    Review
  7. Article
  8. Article
  9. Temperature compensation through kinetic regulation in biochemical oscillators.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  10. Article
  11. Article
  12. The inner workings of an ancient biological clock.Trends in biochemical sciences · 2024
    Review
  13. Article
  14. Review
  15. Article
  16. Review
  17. Article
  18. Article
  19. Article
  20. Frontiers in physiology · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 1 country.

Naohiro KawamotoDepartment of Electrical Engineering and Biological Science, Waseda University, Tokyo, 162-0056, Japan.ORCID http://orcid.org/0000-0003-4252-0963
Hiroshi ItoFaculty of Design, Kyushu University, Fukuoka, 815-8540, Japan.ORCID http://orcid.org/0000-0002-7220-6011
Isao T TokudaGraduate School of Science and Engineering, Ritsumeikan University, Shiga, 525-8577, Japan.ORCID http://orcid.org/0000-0001-6212-0022
Hideo IwasakiDepartment of Electrical Engineering and Biological Science, Waseda University, Tokyo, 162-0056, Japan. hideo-iwasaki@waseda.jp.ORCID http://orcid.org/0000-0002-3754-4955
Waseda University · JPKyushu University · JPRitsumeikan University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Proteins KaiA, KaiB and KaiC constitute a biochemical circadian oscillator in the cyanobacterium Synechococcus elongatus. It has been reported kaiA inactivation completely abolishes circadian oscillations. However, we show here that kaiBC promoter activity exhibits a damped, low-amplitude oscillation with a period of approximately 24 h in kaiA-inactivated strains. The damped rhythm resonates with external cycles with a period of 24-26 h, indicating that its natural frequency is similar to that of the circadian clock. Double-mutation experiments reveal that kaiC, kaiB, and sasA (encoding a KaiC-binding histidine kinase) are all required for the damped oscillation. Further analysis suggests that the kaiA-less damped transcriptional rhythm requires KaiB-KaiC complex formation and the transcription-translation feedback loop, but not the KaiC phosphorylation cycle. Our results provide insights into mechanisms that could potentially underlie the diurnal/circadian behaviors observed in other bacterial species that possess kaiB and kaiC homologues but lack a kaiA homologue.

Indexed as

Bacterial ProteinsBlotting, WesternCircadian RhythmLuminescent MeasurementsModels, TheoreticalProtein BindingSynechococcusBacterial Proteins

Identifiers

PMID32382052
PMCPMC7205874
OpenAlexW3020830434

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.