Evidence map›Paper›PMID 32380983›Full record

ArticleBMC medical informatics and decision making2020

Derivation and validation of a computable phenotype for acute decompensated heart failure in hospitalized patients.

Rahul Kashyap, Kumar Sarvottam, Gregory A Wilson, Jacob C Jentzer, Mohamed O Seisa, Kianoush B Kashani

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In one paragraph

Article in BMC medical informatics and decision making, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

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19citing papers in PubMed
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1 · What the graph read from it

What it found

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2 · The registry

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3 · Its place in the literature

Who cites it

19 citing papers in PubMed.

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  19. Using Machine Learning for Early Prediction of Cardiogenic Shock in Patients With Acute Heart Failure.Journal of the Society for Cardiovascular Angiography & Interventions
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4 · The record

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5 · Who and what money

Authors and funding

6 authors.

Rahul KashyapMultidisciplinary Epidemiological and Translational Research in Intensive Care, Mayo Clinic, Rochester, MN, USA. Kashyap.Rahul@mayo.edu.ORCID 0000-0002-4383-3411
Kumar SarvottamMultidisciplinary Epidemiological and Translational Research in Intensive Care, Mayo Clinic, Rochester, MN, USA.
Gregory A WilsonMultidisciplinary Epidemiological and Translational Research in Intensive Care, Mayo Clinic, Rochester, MN, USA.
Jacob C JentzerMultidisciplinary Epidemiological and Translational Research in Intensive Care, Mayo Clinic, Rochester, MN, USA.
Mohamed O SeisaMultidisciplinary Epidemiological and Translational Research in Intensive Care, Mayo Clinic, Rochester, MN, USA.
Kianoush B KashaniMultidisciplinary Epidemiological and Translational Research in Intensive Care, Mayo Clinic, Rochester, MN, USA.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundWith higher adoption of electronic health records at health-care centers, electronic search algorithms (computable phenotype) for identifying acute decompensated heart failure (ADHF) among hospitalized patients can be an invaluable tool to enhance data abstraction accuracy and efficacy in order to improve clinical research accrual and patient centered outcomes. We aimed to derive and validate a computable phenotype for ADHF in hospitalized patients.

methodsWe screened 256, 443 eligible (age > 18 years and with prior research authorization) individuals who were admitted to Mayo Clinic Hospital in Rochester, MN, from January 1, 2006, through December 31, 2014. Using a randomly selected derivation cohort of 938 patients, several iterations of a free-text electronic search were developed and refined. The computable phenotype was subsequently validated in an independent cohort 100 patients. The sensitivity and specificity of the computable phenotype were compared to the gold standard (expert review of charts) and International Classification of Diseases-9 (ICD-9) codes for Acute Heart Failure.

resultsIn the derivation cohort, the computable phenotype achieved a sensitivity of 97.5%, and specificity of 100%, whereas ICD-9 codes for Acute Heart Failure achieved a sensitivity of 47.5% and specificity of 96.7%. When all Heart Failure codes (ICD-9) were used, sensitivity and specificity were 97.5 and 86.6%, respectively. In the validation cohort, the sensitivity and specificity of the computable phenotype were 100 and 98.5%. The sensitivity and specificity for the ICD-9 codes (Acute Heart Failure) were 42 and 98.5%. Upon use of all Heart Failure codes (ICD-9), sensitivity and specificity were 96.8 and 91.3%.

conclusionsOur results suggest that using computable phenotype to ascertain ADHF from the clinical notes contained within the electronic medical record are feasible and reliable. Our computable phenotype outperformed ICD-9 codes for the detection of ADHF.

Indexed as

Heart FailureAdultAlgorithmsElectronic Health RecordsHumansInpatientsInternational Classification of DiseasesMiddle AgedPhenotypeAcute decompensated heart failureAcute heart failureADHFElectronic algorithmICD-9

Identifiers

PMID32380983
PMCPMC7206747

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.