Evidence map›Paper›PMID 32379761›Full record

ArticlePLoS genetics2020

Separable, Ctf4-mediated recruitment of DNA Polymerase α for initiation of DNA synthesis at replication origins and lagging-strand priming during replication elongation.

Sarina Y Porcella, Natasha C Koussa, Colin P Tang, Daphne N Kramer, Priyanka Srivastava, Duncan J Smith

Abstract read
In one paragraph

Article in PLoS genetics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Eukaryotic Lagging Strand Synthesis is Distributive.bioRxiv : the preprint server for biology · 2025
    Article
  7. Article
  8. Article
  9. Dominant and genome-wide formation of DNA:RNA hybrid G-quadruplexes in living yeast cells.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Review
  15. Article
  16. Review
  17. Article
  18. Review
  19. Analysis of APOBEC-induced mutations in yeast strains with low levels of replicative DNA polymerases.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Sarina Y PorcellaDepartment of Biology, New York University, New York, NY, United States of America.ORCID 0000-0002-1926-2532
Natasha C KoussaDepartment of Biology, New York University, New York, NY, United States of America.
Colin P TangDepartment of Biology, New York University, New York, NY, United States of America.ORCID 0000-0001-9361-8085
Daphne N KramerDepartment of Biology, New York University, New York, NY, United States of America.ORCID 0000-0003-2760-3293
Priyanka SrivastavaDepartment of Biology, New York University, New York, NY, United States of America.ORCID 0000-0002-7981-0406
Duncan J SmithDepartment of Biology, New York University, New York, NY, United States of America.ORCID 0000-0002-0898-8629

Funding

Direct in vivo characterization of eukaryotic replisome activityR01GM114340 · NIGMS · NEW YORK UNIVERSITY · PI SMITH, DUNCAN J · 2015 to 2019
$1.5M
NIGMS NIH HHS R01 GM114340
6 · The paper itself

Abstract

During eukaryotic DNA replication, DNA polymerase alpha/primase (Pol α) initiates synthesis on both the leading and lagging strands. It is unknown whether leading- and lagging-strand priming are mechanistically identical, and whether Pol α associates processively or distributively with the replisome. Here, we titrate cellular levels of Pol α in S. cerevisiae and analyze Okazaki fragments to study both replication initiation and ongoing lagging-strand synthesis in vivo. We observe that both Okazaki fragment initiation and the productive firing of replication origins are sensitive to Pol α abundance, and that both processes are disrupted at similar Pol α concentrations. When the replisome adaptor protein Ctf4 is absent or cannot interact with Pol α, lagging-strand initiation is impaired at Pol α concentrations that still support normal origin firing. Additionally, we observe that activation of the checkpoint becomes essential for viability upon severe depletion of Pol α. Using strains in which the Pol α-Ctf4 interaction is disrupted, we demonstrate that this checkpoint requirement is not solely caused by reduced lagging-strand priming. Our results suggest that Pol α recruitment for replication initiation and ongoing lagging-strand priming are distinctly sensitive to the presence of Ctf4. We propose that the global changes we observe in Okazaki fragment length and origin firing efficiency are consistent with distributive association of Pol α at the replication fork, at least when Pol α is limiting.

Indexed as

DNA ReplicationReplication OriginDNADNA-Binding ProteinsDNA, FungalDNA Polymerase IDNA PrimaseOrganisms, Genetically ModifiedProtein BindingSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsTranscription Elongation, GeneticCTF4 protein, S cerevisiaeDNADNA-Binding ProteinsDNA, FungalDNA polymerase alpha-primaseDNA Polymerase IDNA PrimaseOkazaki fragmentsSaccharomyces cerevisiae Proteins

Identifiers

PMID32379761
PMCPMC7237047

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.