Evidence map›Paper›PMID 32377887›Full record

ArticleFunctional & integrative genomics2020

Chaperone client proteins evolve slower than non-client proteins.

Manish Prakash Victor, Debarun Acharya, Sandip Chakraborty, Tapash Chandra Ghosh

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Article in Functional & integrative genomics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.5field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 7 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Manish Prakash VictorDivision of Bioinformatics, Bose Institute, Kolkata, West Bengal, India.
Debarun AcharyaDepartment of Microbiology, Bose Institute, Kolkata, West Bengal, India.
Sandip ChakrabortyDivision of Bioinformatics, Bose Institute, Kolkata, West Bengal, India. sandip1983in@gmail.com.
Tapash Chandra GhoshDivision of Bioinformatics, Bose Institute, Kolkata, West Bengal, India. tapash@jcbose.ac.in.
Bose Institute · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Chaperones are important molecular machinery that assists proteins to attain their native three-dimensional structure crucial for function. Earlier studies using experimental evolution showed that chaperones impose a relaxation of sequence constraints on their "client" proteins, which may lead to the fixation of slightly deleterious mutations on the latter. However, we hypothesized that such a phenomenon might be harmful to the organism in a natural physiological condition. In this study, we investigated the evolutionary rates of chaperone client and non-client proteins in five model organisms from both prokaryotic and eukaryotic lineages. Our study reveals a slower evolutionary rate of chaperone client proteins in all five organisms. Additionally, the slower folding rate and lower aggregation propensity of chaperone client proteins reveal that the chaperone may play an essential role in rescuing the slightly disadvantageous effects due to random mutations and subsequent protein misfolding. However, the fixation of such mutations is less likely to be selected in the natural population.

Indexed as

Evolution, MolecularMolecular ChaperonesAnimalsBacterial ProteinsDrosophila melanogasterDrosophila ProteinsEscherichia coli ProteinsHumansMutationProtein AggregatesProtein FoldingProtein Interaction MappingProteinsSaccharomyces cerevisiae ProteinsThermusBacterial ProteinsDrosophila ProteinsEscherichia coli ProteinsMolecular ChaperonesProtein AggregatesProteinsSaccharomyces cerevisiae ProteinsChaperoneChaperone client proteinsEvolutionary rateProtein aggregation propensityProtein folding rate

Identifiers

PMID32377887
OpenAlexW3021368656

What OpenQuestion holds

Textmetadata
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.