Evidence map›Paper›PMID 32376862›Full record

ArticleNature communications2020

Structural basis for the complex DNA binding behavior of the plant stem cell regulator WUSCHEL.

Jeremy Sloan, Jana P Hakenjos, Michael Gebert, Olga Ermakova, Andrea Gumiero, Gunter Stier, Klemens Wild, Irmgard Sinning, Jan U Lohmann

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
5.3field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 42 citations in OpenAlex.

  1. Review
  2. WUSCHEL Transcription Factor: From Stem Cell Maintenance to Crop Improvement.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
    Review
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  11. Review
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  16. Review
  17. Stem Cells: Engines of Plant Growth and Development.International journal of molecular sciences · 2023
    Review
  18. Article
  19. The NGATHA-like GenesInternational journal of molecular sciences · 2022
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 3 countries.

Jeremy SloanBiochemistry Center, Heidelberg University, Im Neuenheimer Feld 328, 69120, Heidelberg, Germany.
Jana P HakenjosDepartment of Stem Cell Biology, Centre for Organismal Studies, Heidelberg University, Im Neuenheimer Feld 230, 69120, Heidelberg, Germany.
Michael GebertDepartment of Stem Cell Biology, Centre for Organismal Studies, Heidelberg University, Im Neuenheimer Feld 230, 69120, Heidelberg, Germany.ORCID http://orcid.org/0000-0003-4169-4152
Olga ErmakovaDepartment of Stem Cell Biology, Centre for Organismal Studies, Heidelberg University, Im Neuenheimer Feld 230, 69120, Heidelberg, Germany.
Andrea GumieroBiochemistry Center, Heidelberg University, Im Neuenheimer Feld 328, 69120, Heidelberg, Germany.
Gunter StierBiochemistry Center, Heidelberg University, Im Neuenheimer Feld 328, 69120, Heidelberg, Germany.
Klemens WildBiochemistry Center, Heidelberg University, Im Neuenheimer Feld 328, 69120, Heidelberg, Germany.
Irmgard SinningBiochemistry Center, Heidelberg University, Im Neuenheimer Feld 328, 69120, Heidelberg, Germany. irmi.sinning@bzh.uni-heidelberg.de.ORCID http://orcid.org/0000-0001-9127-4477
Jan U LohmannDepartment of Stem Cell Biology, Centre for Organismal Studies, Heidelberg University, Im Neuenheimer Feld 230, 69120, Heidelberg, Germany. jan.lohmann@cos.uni-heidelberg.de.ORCID http://orcid.org/0000-0003-3667-187X
Heidelberg University · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Stem cells are one of the foundational evolutionary novelties that allowed the independent emergence of multicellularity in the plant and animal lineages. In plants, the homeodomain (HD) transcription factor WUSCHEL (WUS) is essential for the maintenance of stem cells in the shoot apical meristem. WUS has been reported to bind to diverse DNA motifs and to act as transcriptional activator and repressor. However, the mechanisms underlying this remarkable behavior have remained unclear. Here, we quantitatively delineate WUS binding to three divergent DNA motifs and resolve the relevant structural underpinnings. We show that WUS exhibits a strong binding preference for TGAA repeat sequences, while retaining the ability to weakly bind to TAAT elements. This behavior is attributable to the formation of dimers through interactions of specific residues in the HD that stabilize WUS DNA interaction. Our results provide a mechanistic basis for dissecting WUS dependent regulatory networks in plant stem cell control.

Indexed as

ArabidopsisArabidopsis ProteinsDimerizationDNAHomeodomain ProteinsNucleotide MotifsPlant ShootsProtein BindingRepetitive Sequences, Nucleic AcidTranscription FactorsArabidopsis ProteinsDNAHomeodomain ProteinsTranscription FactorsWUSCHEL protein, Arabidopsis

Identifiers

PMID32376862
PMCPMC7203112
OpenAlexW3023043220

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.