Evidence map›Paper›PMID 32376415›Full record

ArticleJournal of hepatology2020

Immunity-related GTPase induces lipophagy to prevent excess hepatic lipid accumulation.

Kristin Schwerbel, Anne Kamitz, Natalie Krahmer, Nicole Hallahan, Markus Jähnert, Pascal Gottmann, Sandra Lebek, Tanja Schallschmidt, Danny Arends, Fabian Schumacher and 12 more

Open access · bronzeAbstract read
In one paragraph

Article in Journal of hepatology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
4.8field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 48 citations in OpenAlex.

  1. Review
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  14. Alterations of Lipid Profile in Livers with Impaired Lipophagy.International journal of molecular sciences · 2022
    Article
  15. Article
  16. Article
  17. Article
  18. Review
  19. Enriched Alternative Splicing in Islets of Diabetes-Susceptible Mice.International journal of molecular sciences · 2021
    Article
  20. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

22 authors at 6 institutions in 2 countries.

Kristin SchwerbelDepartment of Experimental Diabetology, German Institute of Human Nutrition Potsdam-Rehbruecke, D-14558 Nuthetal, Germany; German Center for Diabetes Research, D-85764 München-Neuherberg, Germany.
Anne KamitzDepartment of Experimental Diabetology, German Institute of Human Nutrition Potsdam-Rehbruecke, D-14558 Nuthetal, Germany; German Center for Diabetes Research, D-85764 München-Neuherberg, Germany.
Natalie KrahmerGerman Center for Diabetes Research, D-85764 München-Neuherberg, Germany; Department of Proteomics and Signal Transduction, Max-Planck Institute of Biochemistry, D-82152 Martinsried, Germany; Institute for Diabetes and Obesity, Helmholtz Zentrum München, D-85764 München-Neuherberg, Germany.
Nicole HallahanDepartment of Experimental Diabetology, German Institute of Human Nutrition Potsdam-Rehbruecke, D-14558 Nuthetal, Germany; German Center for Diabetes Research, D-85764 München-Neuherberg, Germany.
Markus JähnertDepartment of Experimental Diabetology, German Institute of Human Nutrition Potsdam-Rehbruecke, D-14558 Nuthetal, Germany; German Center for Diabetes Research, D-85764 München-Neuherberg, Germany.
Pascal GottmannDepartment of Experimental Diabetology, German Institute of Human Nutrition Potsdam-Rehbruecke, D-14558 Nuthetal, Germany; German Center for Diabetes Research, D-85764 München-Neuherberg, Germany.
Sandra LebekGerman Center for Diabetes Research, D-85764 München-Neuherberg, Germany; Medical Faculty, Institute for Clinical Biochemistry and Pathobiochemistry, German Diabetes Center, Leibniz Center for Diabetes Research at Heinrich Heine University Düsseldorf, D-40225, Düsseldorf, Germany.
Tanja SchallschmidtGerman Center for Diabetes Research, D-85764 München-Neuherberg, Germany; Medical Faculty, Institute for Clinical Biochemistry and Pathobiochemistry, German Diabetes Center, Leibniz Center for Diabetes Research at Heinrich Heine University Düsseldorf, D-40225, Düsseldorf, Germany.
Danny ArendsAnimal Breeding Biology and Molecular Genetics, Albrecht Daniel Thaer-Institute of Agricultural and Horticultural Sciences, Humboldt-Universität zu Berlin, D-10117 Berlin, Germany.
Fabian SchumacherInstitute of Nutritional Science, Department of Toxicology, University of Potsdam, D-14558 Nuthetal, Germany.
Burkhard KleuserInstitute of Nutritional Science, Department of Toxicology, University of Potsdam, D-14558 Nuthetal, Germany.
Tom HaltenhofDepartment of Biology, Chemistry, Pharmacy, Freie Universität Berlin, Institute of Chemistry and Biochemistry, Laboratory of RNA Biochemistry, D-14195 Berlin, Germany.
Florian HeydDepartment of Biology, Chemistry, Pharmacy, Freie Universität Berlin, Institute of Chemistry and Biochemistry, Laboratory of RNA Biochemistry, D-14195 Berlin, Germany.
Sofiya GanchevaGerman Center for Diabetes Research, D-85764 München-Neuherberg, Germany; Institute for Clinical Diabetology, German Diabetes Center, Leibniz Institute for Diabetes Research, Heinrich-Heine University Düsseldorf, D-40225 Düsseldorf, Germany; Department of Endocrinology and Diabetology, Medical Faculty, Heinrich-Heine University, D-40225 Düsseldorf, Germany.
Karl W BromanDepartment of Biostatistics and Medical Informatics, University of Wisconsin, WI 53706 Madison, Wisconsin, United States.
Michael RodenGerman Center for Diabetes Research, D-85764 München-Neuherberg, Germany; Institute for Clinical Diabetology, German Diabetes Center, Leibniz Institute for Diabetes Research, Heinrich-Heine University Düsseldorf, D-40225 Düsseldorf, Germany; Department of Endocrinology and Diabetology, Medical Faculty, Heinrich-Heine University, D-40225 Düsseldorf, Germany.
Hans-Georg JoostDepartment of Experimental Diabetology, German Institute of Human Nutrition Potsdam-Rehbruecke, D-14558 Nuthetal, Germany; German Center for Diabetes Research, D-85764 München-Neuherberg, Germany.
Alexandra ChadtGerman Center for Diabetes Research, D-85764 München-Neuherberg, Germany; Medical Faculty, Institute for Clinical Biochemistry and Pathobiochemistry, German Diabetes Center, Leibniz Center for Diabetes Research at Heinrich Heine University Düsseldorf, D-40225, Düsseldorf, Germany.
Hadi Al-HasaniGerman Center for Diabetes Research, D-85764 München-Neuherberg, Germany; Medical Faculty, Institute for Clinical Biochemistry and Pathobiochemistry, German Diabetes Center, Leibniz Center for Diabetes Research at Heinrich Heine University Düsseldorf, D-40225, Düsseldorf, Germany.
Heike VogelDepartment of Experimental Diabetology, German Institute of Human Nutrition Potsdam-Rehbruecke, D-14558 Nuthetal, Germany; German Center for Diabetes Research, D-85764 München-Neuherberg, Germany.
Wenke JonasDepartment of Experimental Diabetology, German Institute of Human Nutrition Potsdam-Rehbruecke, D-14558 Nuthetal, Germany; German Center for Diabetes Research, D-85764 München-Neuherberg, Germany. Electronic address: wenke.jonas@dife.de.
Annette SchürmannDepartment of Experimental Diabetology, German Institute of Human Nutrition Potsdam-Rehbruecke, D-14558 Nuthetal, Germany; German Center for Diabetes Research, D-85764 München-Neuherberg, Germany; University of Potsdam, Institute of Nutritional Sciences, D-14558 Nuthetal, Germany. Electronic address: schuermann@dife.de.
Deutsches Diabetes-Zentrum e.V. · DEUniversity of Potsdam · DEFreie Universität Berlin · DEHelmholtz Zentrum München · DEHumboldt-Universität zu Berlin · DEUniversity of Wisconsin–Madison · US

Funding

Systems Genetic Analysis of Multi-parent CrossesR01GM070683 · NIGMS · JACKSON LABORATORY · PI BROMAN, KARL W, CHURCHILL, GARY A · 2004 to 2022
$6.8M
NIGMS NIH HHS R01 GM070683
6 · The paper itself

Abstract

BACKGROUND &

aimsCurrently, only a few genetic variants explain the heritability of fatty liver disease. Quantitative trait loci (QTL) analysis of mouse strains has identified the susceptibility locus Ltg/NZO (liver triglycerides from New Zealand obese [NZO] alleles) on chromosome 18 as associating with increased hepatic triglycerides. Herein, we aimed to identify genomic variants responsible for this association.

methodsRecombinant congenic mice carrying 5.3 Mbp of Ltg/NZO were fed a high-fat diet and characterized for liver fat. Bioinformatic analysis, mRNA profiles and electrophoretic mobility shift assays were performed to identify genes responsible for the Ltg/NZO phenotype. Candidate genes were manipulated in vivo by injecting specific microRNAs into C57BL/6 mice. Pulldown coupled with mass spectrometry-based proteomics and immunoprecipitation were performed to identify interaction partners of IFGGA2.

resultsThrough positional cloning, we identified 2 immunity-related GTPases (Ifgga2, Ifgga4) that prevent hepatic lipid storage. Expression of both murine genes and the human orthologue IRGM was significantly lower in fatty livers. Accordingly, liver-specific suppression of either Ifgga2 or Ifgga4 led to a 3-4-fold greater increase in hepatic fat content. In the liver of low-fat diet-fed mice, IFGGA2 localized to endosomes/lysosomes, while on a high-fat diet it associated with lipid droplets. Pulldown experiments and proteomics identified the lipase ATGL as a binding partner of IFGGA2 which was confirmed by co-immunoprecipitation. Both proteins partially co-localized with the autophagic marker LC3B. Ifgga2 suppression in hepatocytes reduced the amount of LC3B-II, whereas overexpression of Ifgga2 increased the association of LC3B with lipid droplets and decreased triglyceride storage.

conclusionIFGGA2 interacts with ATGL and protects against hepatic steatosis, most likely by enhancing the binding of LC3B to lipid droplets. LAY SUMMARY: The genetic basis of non-alcoholic fatty liver disease remains incompletely defined. Herein, we identified members of the immunity-related GTPase family in mice and humans that act as regulators of hepatic fat accumulation, with links to autophagy. Overexpression of the gene Ifgga2 was shown to reduce hepatic lipid storage and could be a therapeutic target for the treatment of fatty liver disease.

Indexed as

Gene Expression RegulationAcyltransferasesAnimalsAutophagyDisease Models, AnimalFatty LiverFemaleGTP-Binding ProteinsGTP PhosphohydrolasesHepatocytesHep G2 CellsHumansLipaseLipid MetabolismLiverMaleAcyltransferasesGTP-Binding ProteinsGTP PhosphohydrolasesIfi1 protein, mouseLipaseMap1lc3b protein, mouseMicrotubule-Associated ProteinsPNPLA2 protein, mouseRNAFatty liverImmunity-related GTPasesmiRNANAFLDPositional cloning

Identifiers

PMID32376415
PMCPMC7957830
OpenAlexW3021537272

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.