Evidence map›Paper›PMID 32375599›Full record

ArticleVascular2020

RNA-sequencing analysis of differential gene expression associated with arterial stiffness.

Jeongok G Logan, Sijung Yun, Yongde Bao, Emily Farber, Charles R Farber

Open access · greenAbstract read
In one paragraph

Article in Vascular, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.4field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 26 citations in OpenAlex.

  1. Article
  2. Article
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  4. Article
  5. Distinct peripheral blood monocyte and neutrophil transcriptional programs following intracerebral hemorrhage and different etiologies of ischemic stroke.Journal of cerebral blood flow and metabolism : official journal of the International Society of Cerebral Blood Flow and Metabolism · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Jeongok G LoganUniversity of Virginia, Charlottesville, USA.ORCID https://orcid.org/0000-0002-6599-6975
Sijung YunZtoMed Inc, Bethesda, USA.
Yongde BaoDepartment of Microbiology, Immunology, and Cancer Biology, University of Virginia, Charlottesville, USA.
Emily FarberCenter for Public Health Genomics, School of Medicine, University of Virginia, Charlottesville, USA.
Charles R FarberDepartment of Public Health Sciences and Biochemistry and Molecular Genetics, Center for Public Health Genomics, University of Virginia, Charlottesville, USA.
University of Virginia · USOffice of Public Health Genomics · US

Funding

Effects of Psychological Stress on Arterial StiffnessK23NR016215 · NINR · UNIVERSITY OF VIRGINIA · PI LOGAN, JEONGOK GANG · 2016 to 2018
$441k
NINR NIH HHS K23 NR016215
6 · The paper itself

Abstract

objectivesArterial stiffness is recognized as an important predictor of cardiovascular disease morbidity and mortality, independent of traditional cardiovascular disease risk factors. Given that arterial tissue is not easily accessible, most gene expression studies on arterial stiffness have been conducted on animals or on patients who have undergone by-pass surgeries. In order to obtain a deeper understanding of early changes of arterial stiffness, this study compared transcriptome profiles between healthy adults with higher and lower arterial stiffness.

methodsThe sample included 20 healthy female adults without cardiovascular disease. Arterial stiffness was measured by carotid-femoral pulse wave velocity, the "gold-standard" measure of central arterial stiffness. Peripheral blood samples collected to PAXgene™ RNA tubes were used for RNA sequencing (RNA-seq). The potential confounding effects of age, body mass index, and mean arterial pressure were controlled for in RNA-seq analysis. To validate RNA-seq results, quantitative real-time PCR (qRT-PCR) was performed for six selected genes.

resultsThe findings demonstrated that genes including

conclusionsPrevious studies have suggested the potential roles of

Indexed as

Gene Expression ProfilingRNA-SeqTranscriptomeAdolescentAdultAminopeptidasesArterial PressureCalpainCarotid-Femoral Pulse Wave VelocityDown-RegulationFemaleGene Regulatory NetworksHumansInterleukinsMiddle AgedVascular StiffnessAminopeptidasesCalpainCAPN9 protein, humanERAP2 protein, humanIL32 protein, humanInterleukinsarterial stiffnesspulse wave velocityRNA-seqtranscriptome

Identifiers

PMID32375599
PMCPMC8846553
OpenAlexW3021871136

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.