Evidence map›Paper›PMID 32374788›Full record

ArticlePloS one2020

Surface runoff alters cave microbial community structure and function.

Madison C Davis, Maria A Messina, Giuseppe Nicolosi, Salvatore Petralia, Melvin D Baker, Christiana K S Mayne, Chelsea M Dinon, Christina J Moss, Bogdan P Onac, James R Garey

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.6field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 16 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 2 countries.

Madison C DavisDepartment of Cell Biology, Microbiology and Molecular Biology, University of South Florida, Tampa, FL, United States of America.
Maria A MessinaCentro Speleologico Etneo, Catania, Italy.
Giuseppe NicolosiCentro Speleologico Etneo, Catania, Italy.
Salvatore PetraliaCentro Speleologico Etneo, Catania, Italy.
Melvin D BakerDepartment of Cell Biology, Microbiology and Molecular Biology, University of South Florida, Tampa, FL, United States of America.
Christiana K S MayneDepartment of Cell Biology, Microbiology and Molecular Biology, University of South Florida, Tampa, FL, United States of America.
Chelsea M DinonDepartment of Cell Biology, Microbiology and Molecular Biology, University of South Florida, Tampa, FL, United States of America.
Christina J MossDepartment of Cell Biology, Microbiology and Molecular Biology, University of South Florida, Tampa, FL, United States of America.
Bogdan P OnacKarst Research Group, School of Geosciences, University of South Florida, Tampa, FL, United States of America.
James R GareyDepartment of Cell Biology, Microbiology and Molecular Biology, University of South Florida, Tampa, FL, United States of America.ORCID 0000-0001-8205-5563
University of South Florida · USUniversity of Turin · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Caves formed by sulfuric acid dissolution have been identified worldwide. These caves can host diverse microbial communities that are responsible for speleogenesis and speleothem formation. It is not well understood how microbial communities change in response to surface water entering caves. Illumina 16S rRNA sequencing and bioinformatic tools were used to determine the impact of surface water on the microbial community diversity and function within a spring pool found deep in the Monte Conca Cave system in Sicily, Italy. Sulfur oxidizers comprised more than 90% of the microbial community during the dry season and were replaced by potential anthropogenic contaminants such as Escherichia and Lysinibacillus species after heavy rains. One sampling date appeared to show a transition between the wet and dry seasons when potential anthropogenic contaminants (67.3%), sulfur-oxidizing bacteria (13.6%), and nitrogen-fixing bacteria (6.5%) were all present within the spring pool.

Indexed as

Water MicrobiologyWettabilityBacillaceaeBase SequenceCavesDNA, BacterialDroughtsEscherichiaHydrogen SulfideMicrobiotaRainRNA, Ribosomal, 16SSeasonsSicilySoil MicrobiologySulfatesDNA, BacterialHydrogen SulfideRNA, Ribosomal, 16SSulfates

Identifiers

PMID32374788
PMCPMC7202643
OpenAlexW3023095537

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.