Evidence map›Paper›PMID 32372012›Full record

ArticleScientific reports2020

Historic recombination in a durum wheat breeding panel enables high-resolution mapping of Fusarium head blight resistance quantitative trait loci.

Ehsan Sari, Ron E Knox, Yuefeng Ruan, Maria Antonia Henriquez, Santosh Kumar, Andrew J Burt, Richard D Cuthbert, David J Konkin, Sean Walkowiak, Heather L Campbell and 10 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed, 1 pooled it
3.0field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 1 synthesis or guideline pooled it, 18 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Review
  4. Article
  5. Pyramiding Fusarium head blight resistance QTL from T. aestivum, T. dicoccum and T. dicoccoides in durum wheat.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2023
    Article
  6. Toxins · 2023
    Article
  7. Article
  8. Article
  9. Article
  10. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors at 6 institutions in 2 countries.

Ehsan SariAquatic and Crop Resource Development Centre, National Research Council, Saskatoon, SK, Canada.
Ron E KnoxSwift Current Research and Development Centre, Agriculture and Agri-Food Canada, Swift Current, SK, Canada. ron.knox@canada.ca.
Yuefeng RuanSwift Current Research and Development Centre, Agriculture and Agri-Food Canada, Swift Current, SK, Canada. yuefeng.ruan@canada.ca.
Maria Antonia HenriquezMorden Research and Development Centre, Agriculture and Agri-Food Canada, Morden, MB, Canada.
Santosh KumarBrandon Research and Development Centre, Agriculture and Agri-Food Canada, Brandon, MB, Canada.
Andrew J BurtOttawa Research and Development Centre, Agriculture and Agri-Food Canada, Ottawa, ON, Canada.
Richard D CuthbertSwift Current Research and Development Centre, Agriculture and Agri-Food Canada, Swift Current, SK, Canada.
David J KonkinAquatic and Crop Resource Development Centre, National Research Council, Saskatoon, SK, Canada.
Sean WalkowiakDepartment of Plant Sciences, University of Saskatchewan, Saskatoon, SK, Canada.
Heather L CampbellSwift Current Research and Development Centre, Agriculture and Agri-Food Canada, Swift Current, SK, Canada.
Asheesh K SinghDepartment of Agronomy, Iowa State University, Ames, Iowa, United States of America.
Jay RossSwift Current Research and Development Centre, Agriculture and Agri-Food Canada, Swift Current, SK, Canada.
Prabhath LokurugeSwift Current Research and Development Centre, Agriculture and Agri-Food Canada, Swift Current, SK, Canada.
Emma HsuehAquatic and Crop Resource Development Centre, National Research Council, Saskatoon, SK, Canada.
Kerry BoyleAquatic and Crop Resource Development Centre, National Research Council, Saskatoon, SK, Canada.
Christine SidebottomAquatic and Crop Resource Development Centre, National Research Council, Saskatoon, SK, Canada.
Janet CondieAquatic and Crop Resource Development Centre, National Research Council, Saskatoon, SK, Canada.
Shawn YatesSwift Current Research and Development Centre, Agriculture and Agri-Food Canada, Swift Current, SK, Canada.
Curtis J PozniakDepartment of Plant Sciences, University of Saskatchewan, Saskatoon, SK, Canada.
Pierre R FobertAquatic and Crop Resource Development Centre, National Research Council, Ottawa, ON, Canada.
Agriculture and Agri-Food Canada · CASaskatchewan Research Council (Canada) · CAUniversity of Saskatchewan · CAIowa State University · USNational Research Council Canada · CAOttawa Research and Development Centre

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The durum wheat line DT696 is a source of moderate Fusarium head blight (FHB) resistance. Previous analysis using a bi-parental population identified two FHB resistance quantitative trait loci (QTL) on chromosome 5A: 5A1 was co-located with a plant height QTL, and 5A2 with a major maturity QTL. A Genome-Wide Association Study (GWAS) of DT696 derivative lines from 72 crosses based on multi-environment FHB resistance, plant height, and maturity phenotypic data was conducted to improve the mapping resolution and further elucidate the genetic relationship of height and maturity with FHB resistance. The Global Tetraploid Wheat Collection (GTWC) was exploited to identify durum wheat lines with DT696 allele and additional recombination events. The 5A2 QTL was confirmed in the derivatives, suggesting the expression stability of the 5A2 QTL in various genetic backgrounds. The GWAS led to an improved mapping resolution rendering the 5A2 interval 10 Mbp shorter than the bi-parental QTL mapping interval. Haplotype analysis using SNPs within the 5A2 QTL applied to the GTWC identified novel haplotypes and recombination breakpoints, which could be exploited for further improvement of the mapping resolution. This study suggested that GWAS of derivative breeding lines is a credible strategy for improving mapping resolution.

Indexed as

Chromosome MappingPlant BreedingQuantitative Trait LociRecombination, GeneticDisease ResistanceFusariumGenetic Association StudiesGenetic Predisposition to DiseaseGenome-Wide Association StudyHost-Pathogen InteractionsLinkage DisequilibriumPlant DiseasesQuantitative Trait, HeritableSelection, GeneticTriticum

Identifiers

PMID32372012
PMCPMC7200731
OpenAlexW3023289771

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.