Evidence map›Paper›PMID 32371454›Full record

ArticleRNA (New York, N.Y.)2020

Nop9 recognizes structured and single-stranded RNA elements of preribosomal RNA.

Jun Zhang, Takamasa Teramoto, Chen Qiu, Robert N Wine, Lauren E Gonzalez, Susan J Baserga, Traci M Tanaka Hall

Open access · bronzeAbstract read
In one paragraph

Article in RNA (New York, N.Y.), 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.3field-weighted citation impact, top 47% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
  2. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Jun ZhangEpigenetics and Stem Cell Biology Laboratory, National Institute of Environmental Health Sciences, National Institutes of Health, Research Triangle Park, North Carolina 27709, USA.
Takamasa TeramotoEpigenetics and Stem Cell Biology Laboratory, National Institute of Environmental Health Sciences, National Institutes of Health, Research Triangle Park, North Carolina 27709, USA.ORCID 0000-0003-1555-5394
Chen QiuEpigenetics and Stem Cell Biology Laboratory, National Institute of Environmental Health Sciences, National Institutes of Health, Research Triangle Park, North Carolina 27709, USA.ORCID 0000-0003-4294-7537
Robert N WineEpigenetics and Stem Cell Biology Laboratory, National Institute of Environmental Health Sciences, National Institutes of Health, Research Triangle Park, North Carolina 27709, USA.
Lauren E GonzalezEpigenetics and Stem Cell Biology Laboratory, National Institute of Environmental Health Sciences, National Institutes of Health, Research Triangle Park, North Carolina 27709, USA.
Susan J BasergaDepartment of Genetics, Yale University School of Medicine, New Haven, Connecticut 06520, USA.
Traci M Tanaka HallEpigenetics and Stem Cell Biology Laboratory, National Institute of Environmental Health Sciences, National Institutes of Health, Research Triangle Park, North Carolina 27709, USA.ORCID 0000-0001-6166-3009
National Institutes of Health · USYale University · US

Funding

Structural Studies Of Post-Transcriptional Gene RegulationZIAES050165 · NIEHS · NATIONAL INSTITUTE OF ENVIRONMENTAL HEALTH SCIENCES · PI HALL, TRACI M · 2009 to 2025
$45.7M
Novel regulatory networks driving human ribosome biogenesisR35GM131687 · NIGMS · YALE UNIVERSITY · PI Susan J Baserga · 2019 to 2026
$5.1M
The Use of Transcriptional Factors as Targets and Agents in CarcinogenesisZIASC000165 · NCI · DIVISION OF CLINICAL SCIENCES - NCI · PI BIRRER, MICHAEL · 2009 to 2009
$187k
Intramural NIH HHS ZIA SC000165NIGMS NIH HHS R35 GM131687
6 · The paper itself

Abstract

Nop9 is an essential factor in the processing of preribosomal RNA. Its absence in yeast is lethal, and defects in the human ortholog are associated with breast cancer, autoimmunity, and learning/language impairment. PUF family RNA-binding proteins are best known for sequence-specific RNA recognition, and most contain eight α-helical repeats that bind to the RNA bases of single-stranded RNA. Nop9 is an unusual member of this family in that it contains eleven repeats and recognizes both RNA structure and sequence. Here we report a crystal structure of

Indexed as

Binding SitesCrystallography, X-RayHumansProtein Conformation, alpha-HelicalRNA-Binding ProteinsRNA, RibosomalSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsNop9 protein, S cerevisiaeRNA-Binding ProteinsRNA, RibosomalSaccharomyces cerevisiae ProteinsNop9PUF proteinribosome biogenesisRNA

Identifiers

PMID32371454
PMCPMC7373996
OpenAlexW3021690678

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.