Evidence map›Paper›PMID 32371399›Full record

ArticleThe Journal of biological chemistry2020

The yeast Hrq1 helicase stimulates Pso2 translesion nuclease activity and thereby promotes DNA interstrand crosslink repair.

Cody M Rogers, Chun-Ying Lee, Samuel Parkins, Nicholas J Buehler, Sabine Wenzel, Francisco Martínez-Márquez, Yuichiro Takagi, Sua Myong, Matthew L Bochman

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.0field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 20 citations in OpenAlex.

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  15. Fanconi anemia-independent DNA inter-strand crosslink repair in eukaryotes.Progress in biophysics and molecular biology · 2020
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Cody M RogersMolecular and Cellular Biochemistry Department, Indiana University, Bloomington, Indiana, USA.
Chun-Ying LeeDepartment of Biophysics, Johns Hopkins University, Baltimore, Maryland, USA.
Samuel ParkinsDepartment of Biology, Johns Hopkins University, Baltimore, Maryland, USA.
Nicholas J BuehlerMolecular and Cellular Biochemistry Department, Indiana University, Bloomington, Indiana, USA.
Sabine WenzelDepartment of Biochemistry and Molecular Biology, Indiana University School of Medicine, Indianapolis, Indiana, USA.
Francisco Martínez-MárquezDepartment of Biochemistry and Molecular Biology, Indiana University School of Medicine, Indianapolis, Indiana, USA.
Yuichiro TakagiDepartment of Biochemistry and Molecular Biology, Indiana University School of Medicine, Indianapolis, Indiana, USA.
Sua MyongDepartment of Biophysics, Johns Hopkins University, Baltimore, Maryland, USA.
Matthew L BochmanMolecular and Cellular Biochemistry Department, Indiana University, Bloomington, Indiana, USA. Electronic address: bochman@indiana.edu.
Indiana University Bloomington · USIndiana University School of MedicineJohns Hopkins University · US

Funding

DNA helicases and associated factors in genome stabilityR35GM133437 · NIGMS · TRUSTEES OF INDIANA UNIVERSITY · PI BOCHMAN, MATTHEW LINNE · 2019 to 2023
$2.4M
Mechanism of transcription regulation by the MediatorR01GM111695 · NIGMS · INDIANA UNIVERSITY INDIANAPOLIS · PI TAKAGI, YUICHIRO · 2015 to 2019
$1.5M
Quantitative Analysis of G-Quadruplex Folding and its Role in Gene ExpressionR01GM115631 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI MYONG, SUA · 2016 to 2019
$1.2M
NIGMS NIH HHS R01 GM111695NIGMS NIH HHS R01 GM115631NIGMS NIH HHS R35 GM133437
6 · The paper itself

Abstract

DNA interstrand crosslink (ICL) repair requires a complex network of DNA damage response pathways. Removal of the ICL lesions is vital, as they are physical barriers to essential DNA processes that require the separation of duplex DNA, such as replication and transcription. The Fanconi anemia (FA) pathway is the principal mechanism for ICL repair in metazoans and is coupled to DNA replication. In

Indexed as

DNADNA-Binding ProteinsDNA DamageDNA RepairEndodeoxyribonucleasesRecQ HelicasesSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsDNADNA-Binding ProteinsEndodeoxyribonucleasesHrq1 protein, S cerevisiaePSO2 protein, S cerevisiaeRecQ HelicasesRECQL4 protein, humanSaccharomyces cerevisiae ProteinsDNA damageDNA helicaseDNA interstrand crosslink (ICL) repairDNA-protein interactionDNA repairhelicaseHrq1nucleasePso2RECQL4Saccharomyces cerevisiaesingle-molecule Förster resonance energy transfer (smFRET)SNM1A

Identifiers

PMID32371399
PMCPMC7335788
OpenAlexW3022227511

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.