Evidence map›Paper›PMID 32370761›Full record

ArticleBMC microbiology2020

Insight to shape of soil microbiome during the ternary cropping system of Gastradia elata.

Qing-Song Yuan, Jiao Xu, Weike Jiang, Xiaohong Ou, Hui Wang, Lanping Guo, Chenghong Xiao, Yanhong Wang, Xiao Wang, Chuanzhi Kang and 1 more

Abstract read
In one paragraph

Article in BMC microbiology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Effects of Different Sources ofPlants (Basel, Switzerland) · 2026
    Article
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  6. Article
  7. Volatiles fromToxins · 2023
    Article
  8. The role of symbiotic fungi in the life cycle ofFrontiers in plant science · 2023
    Review
  9. Effect of symbiotic fungi-Frontiers in microbiology · 2023
    Article
  10. Article
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Qing-Song YuanGuizhou University of Traditional Chinese Medicine, Dongqingnan Road, Guiyang, 540025, Guizhou, China.
Jiao XuGuizhou University of Traditional Chinese Medicine, Dongqingnan Road, Guiyang, 540025, Guizhou, China.
Weike JiangGuizhou University of Traditional Chinese Medicine, Dongqingnan Road, Guiyang, 540025, Guizhou, China.
Xiaohong OuGuizhou University of Traditional Chinese Medicine, Dongqingnan Road, Guiyang, 540025, Guizhou, China.
Hui WangGuizhou University of Traditional Chinese Medicine, Dongqingnan Road, Guiyang, 540025, Guizhou, China.
Lanping GuoNational Resource Center for Chinese Materia Medica, China Academy of Chinese Medical Sciences, Beijing, 100700, China.
Chenghong XiaoGuizhou University of Traditional Chinese Medicine, Dongqingnan Road, Guiyang, 540025, Guizhou, China.
Yanhong WangGuizhou University of Traditional Chinese Medicine, Dongqingnan Road, Guiyang, 540025, Guizhou, China.
Xiao WangShandong Analysis and Test Center, Shandong Academic of Sciences, Jinan, 250014, Shandong, China.
Chuanzhi KangNational Resource Center for Chinese Materia Medica, China Academy of Chinese Medical Sciences, Beijing, 100700, China.
Tao ZhouGuizhou University of Traditional Chinese Medicine, Dongqingnan Road, Guiyang, 540025, Guizhou, China. taozhou88@163.com.

Funding

Guizhou Education Department Innovation Group Major Research Projects Qian Jiao He KY Zi [2018]022he High-level Innovative Talents of Guizhou Province of China Qian Ke He Platform and Talent [2018]5638National Key R&D Program of China 2017YFC700703National Technical System of Traditional Chinese Medicine Industry CARS-21Science and Technology Plan of Guizhou Province Qian Ke He Zhi Cheng [2018]2764the Key Project at Central Government Level 2060302the National Natural Science Foundation of China 81960694the Science and Technology Project in Guizhou Province of China Qian Ke He Platform and Talent [2019]5611
6 · The paper itself

Abstract

backgroundThe ternary cropping system of Gastradia elata depends on a symbiotic relationship with the mycorrhizal fungi Armillaria mellea, which decays wood to assimilate nutrition for the growth of G. elata. The composition of microbe flora as key determinants of rhizoshere and mycorrhizoshere soil fertility and health was investigated to understand how G. elata and A. mellea impacted on its composition. The next generation pyrosequencing analysis was applied to assess the shift of structure of microbial community in rhizoshere of G. elata and mycorrhizoshere of A. mellea compared to the control sample under agriculture process.

resultsThe root-associated microbe floras were significantly impacted by rhizocompartments (including rhizoshere and mycorrhizoshere) and agriculture process. Cropping process of G. elata enhanced the richness and diversity of the microbial community in rhizoshere and mycorrhizoshere soil. Furthermore, planting process of G. elata significantly reduced the abundance of phyla Basidiomycota, Firmicutes and Actinobacteria, while increased the abundance of phyla Ascomycota, Chloroflexi, Proteobacteria, Planctomycetes, and Gemmatimonadetes in rhizoshere and mycorrhizoshere. Besides, A. mellea and G. elata significantly enriched several members of saprophytoic and pathogenic fungus (i.e., Exophiala, Leptodontidium, Cosmospora, Cercophora, Metarhizium, Ilyonectria, and Sporothrix), which will enhance the possibility of G. elata disease incidence. At the same time, the ternary cropping system significantly deterred several members of beneficial ectomycorrhizal fungus (i.e., Russula, Sebacina, and Amanita), which will reduce the ability to protect G. elata from diseases.

conclusionsIn the ternary cropping system of G. elata, A. mellea and G. elata lead to imbalance of microbial community in rhizoshere and mycorrhizoshere soil, suggested that further studies on maintaining the balance of microbial community in A. mellea mycorrhizosphere and G. elata rhizosphere soil under field conditions may provide a promising avenue for high yield and high quality G. elata.

Indexed as

AgricultureArmillariaBacteriaDNA, BacterialDNA, FungalDNA, Ribosomal SpacerFungiHigh-Throughput Nucleotide SequencingMycorrhizaeOrchidaceaePlant RootsRhizosphereSequence Analysis, DNASoil MicrobiologyWoodDNA, BacterialDNA, FungalDNA, Ribosomal SpacerArmillaria mellaGastradia elataMicrobiomeMycorrhizosphere soilNext generation pyrosequencingRhizosphere soilTernary cropping system

Identifiers

PMID32370761
PMCPMC7201697

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.