Evidence map›Paper›PMID 32369637›Full record

ArticleThe Plant journal : for cell and molecular biology2020

Core spliceosomal Sm proteins as constituents of cytoplasmic mRNPs in plants.

Malwina Hyjek-Składanowska, Mateusz Bajczyk, Marcin Gołębiewski, Przemysław Nuc, Agnieszka Kołowerzo-Lubnau, Artur Jarmołowski, Dariusz Jan Smoliński

Open access · hybridAbstract read
In one paragraph

Article in The Plant journal : for cell and molecular biology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.3field-weighted citation impact, top 43% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 7 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Malwina Hyjek-SkładanowskaDepartment of Cellular and Molecular Biology, Nicolaus Copernicus Univeristy, Lwowska 1, 87-100, Torun, Poland.ORCID 0000-0001-8276-4845
Mateusz BajczykDepartment of Gene Expression, Institute of Molecular Biology and Biotechnology, Adam Mickiewicz University, Umultowska 89, Poznan, 61-614, Poland.ORCID 0000-0001-7043-2827
Marcin GołębiewskiCentre For Modern Interdisciplinary Technologies, Nicolaus Copernicus University, Wilenska 4, 87-100, Torun, Poland.ORCID 0000-0003-2039-8733
Przemysław NucDepartment of Gene Expression, Institute of Molecular Biology and Biotechnology, Adam Mickiewicz University, Umultowska 89, Poznan, 61-614, Poland.ORCID 0000-0002-8380-1166
Agnieszka Kołowerzo-LubnauDepartment of Cellular and Molecular Biology, Nicolaus Copernicus Univeristy, Lwowska 1, 87-100, Torun, Poland.ORCID 0000-0002-1337-6715
Artur JarmołowskiDepartment of Gene Expression, Institute of Molecular Biology and Biotechnology, Adam Mickiewicz University, Umultowska 89, Poznan, 61-614, Poland.ORCID 0000-0002-1073-146X
Dariusz Jan SmolińskiDepartment of Cellular and Molecular Biology, Nicolaus Copernicus Univeristy, Lwowska 1, 87-100, Torun, Poland.ORCID 0000-0002-8272-0196
Nicolaus Copernicus University · PLAdam Mickiewicz University in Poznań · PL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In recent years, research has increasingly focused on the key role of post-transcriptional regulation of messenger ribonucleoprotein (mRNP) function and turnover. As a result of the complexity and dynamic nature of mRNPs, the full composition of a single mRNP complex remains unrevealed and mRNPs are poorly described in plants. Here we identify canonical Sm proteins as part of the cytoplasmic mRNP complex, indicating their function in the post-transcriptional regulation of gene expression in plants. Sm proteins comprise an evolutionarily ancient family of small RNA-binding proteins involved in pre-mRNA splicing. The latest research indicates that Sm could also impact on mRNA at subsequent stages of its life cycle. In this work we show that in the microsporocyte cytoplasm of Larix decidua, the European larch, Sm proteins accumulate within distinct cytoplasmic bodies, also containing polyadenylated RNA. To date, several types of cytoplasmic bodies involved in the post-transcriptional regulation of gene expression have been described, mainly in animal cells. Their role and molecular composition in plants remain less well established, however. A total of 222 mRNA transcripts have been identified as cytoplasmic partners for Sm proteins. The specific colocalization of these mRNAs with Sm proteins within cytoplasmic bodies has been confirmed via microscopic analysis. The results from this work support the hypothesis, that evolutionarily conserved Sm proteins have been adapted to perform a whole repertoire of functions related to the post-transcriptional regulation of gene expression in Eukaryota. This adaptation presumably enabled them to coordinate the interdependent processes of splicing element assembly, mRNA maturation and processing, and mRNA translation regulation, and its degradation.

Indexed as

CytoplasmGene Expression Regulation, PlantLarixPlant ProteinsRibonucleoproteinsRNA-Binding ProteinsRNA, MessengerRNA, PlantRNA, Small CytoplasmicSpliceosomesmessenger ribonucleoproteinPlant ProteinsRibonucleoproteinsRNA-Binding ProteinsRNA, MessengerRNA, PlantRNA, Small Cytoplasmiccajal bodiescytoplasmic bodiesmRNPP-bodiesRIP-seqstress granules

Identifiers

PMID32369637
PMCPMC7540296
OpenAlexW3023458303

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.