Evidence map›Paper›PMID 32369483›Full record

ArticlePloS one2020

Grifolin, neogrifolin and confluentin from the terricolous polypore Albatrellus flettii suppress KRAS expression in human colon cancer cells.

Almas Yaqoob, Wai Ming Li, Victor Liu, Chuyi Wang, Sebastian Mackedenski, Linda E Tackaberry, Hugues B Massicotte, Keith N Egger, Kerry Reimer, Chow H Lee

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed, 1 pooled it
2.6field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 1 synthesis or guideline pooled it, 22 citations in OpenAlex.

  1. Pooled it
  2. IGF2BPs as novel mGenes & diseases · 2024
    Review
  3. Review
  4. Review
  5. Antiproliferative Fatty Acids Isolated from the Polypore FungusJournal of fungi (Basel, Switzerland) · 2022
    Article
  6. Article
  7. Molecules (Basel, Switzerland) · 2022
    Article
  8. Review
  9. Review
  10. Article
  11. Review
  12. Review
  13. Fungal Pigments and Their Roles Associated with Human Health.Journal of fungi (Basel, Switzerland) · 2020
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

Almas YaqoobChemistry and Biochemistry Program, University of Northern British Columbia, Prince George, British Columbia, Canada.
Wai Ming LiChemistry and Biochemistry Program, University of Northern British Columbia, Prince George, British Columbia, Canada.
Victor LiuChemistry and Biochemistry Program, University of Northern British Columbia, Prince George, British Columbia, Canada.
Chuyi WangChemistry and Biochemistry Program, University of Northern British Columbia, Prince George, British Columbia, Canada.
Sebastian MackedenskiChemistry and Biochemistry Program, University of Northern British Columbia, Prince George, British Columbia, Canada.
Linda E TackaberryEcosystem Science and Management Program, University of Northern British Columbia, Prince George, British Columbia, Canada.
Hugues B MassicotteEcosystem Science and Management Program, University of Northern British Columbia, Prince George, British Columbia, Canada.
Keith N EggerEcosystem Science and Management Program, University of Northern British Columbia, Prince George, British Columbia, Canada.
Kerry ReimerChemistry and Biochemistry Program, University of Northern British Columbia, Prince George, British Columbia, Canada.
Chow H LeeChemistry and Biochemistry Program, University of Northern British Columbia, Prince George, British Columbia, Canada.ORCID 0000-0001-6136-7058
University of Northern British Columbia · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In our search for bioactive mushrooms native to British Columbia, we determined that the ethanol extracts from fruiting bodies of the terrestrial polypore Albatrellus flettii had potent anti-cell viability activity. Using bioassay-guided fractionation, mass spectrometry and nuclear magnetic resonance, we successfully isolated three known compounds (grifolin, neogrifolin and confluentin). These compounds represent the major anti-cell viability components from the ethanol extracts of A. flettii. We also identified a novel biological activity for these compounds, specifically in down-regulating KRAS expression in two human colon cancer cell lines. Relatively little is known about the anti-cell viability activity and mechanism of action of confluentin. For the first time, we show the ability of confluentin to induce apoptosis and arrest the cell cycle at the G2/M phase in SW480 human colon cancer cells. The oncogenic insulin-like growth factor 2 mRNA-binding protein 1 (IMP1) has been previously shown to regulate KRAS mRNA expression in colon cancer cells, possibly through its ability to bind to the KRAS transcript. Using a fluorescence polarization assay, we show that confluentin dose-dependently inhibits the physical interaction between KRAS RNA and full-length IMP1. The inhibition also occurs with truncated IMP1 containing the KH1 to KH4 domain (KH1to4 IMP1), but not with the di-domain KH3 and KH4 (KH3&4 IMP1). In addition, unlike the control antibiotic neomycin, grifolin, neogrifolin and confluentin do not bind to KRAS RNA. These results suggest that confluentin inhibits IMP1-KRAS RNA interaction by binding to the KH1&2 di-domains of IMP1. Since the molecular interaction between IMP1 and its target RNAs is a pre-requisite for the oncogenic function of IMP1, confluentin should be further explored as a potential inhibitor of IMP1 in vivo.

Indexed as

BasidiomycotaCell CycleCell Line, TumorCell ProliferationCell SurvivalColonic NeoplasmsDose-Response Relationship, DrugDown-RegulationGene Expression Regulation, NeoplasticHT29 CellsHumansPhenolsPlant ExtractsProto-Oncogene Proteins p21(ras)ResorcinolsRNA-Binding Proteins4-farnesyl-5-methylresorcinolconfluentingrifolinIGF2BP1 protein, humanKRAS protein, humanPhenolsPlant ExtractsProto-Oncogene Proteins p21(ras)ResorcinolsRNA-Binding ProteinsTerpenes

Identifiers

PMID32369483
PMCPMC7199964
OpenAlexW3022586452

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.