Evidence map›Paper›PMID 32367584›Full record

ArticleMolecular microbiology2020

Regulation outside the box: New mechanisms for small RNAs.

Kathrin S Fröhlich, Kai Papenfort

Open access · hybridAbstract read
In one paragraph

Article in Molecular microbiology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
0.9field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 23 citations in OpenAlex.

  1. Article
  2. eIF4E assembly intobioRxiv : the preprint server for biology · 2025
    Article
  3. Review
  4. Article
  5. TheJournal of bacteriology · 2025
    Article
  6. Article
  7. ThebioRxiv : the preprint server for biology · 2024
    Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Kathrin S FröhlichInstitute of Microbiology, Friedrich Schiller University, Jena, Germany.ORCID 0000-0003-2352-9751
Kai PapenfortInstitute of Microbiology, Friedrich Schiller University, Jena, Germany.ORCID 0000-0002-5560-9804
Friedrich Schiller University Jena · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Regulation at the post-transcriptional level is an important mode of gene expression control in bacteria. Small RNA regulators (sRNAs) that act via intramolecular base-pairing with target mRNAs are key players in this process and most often sequester the target's ribosome binding site (RBS) to down-regulate translation initiation. Over the past few years, several exceptions from this mechanism have been reported, revealing that sRNAs are able to influence translation initiation from a distance. In this issue of Molecular Microbiology, Azam and Vanderpool show that repression of the manY mRNA by the sRNA SgrS relies on an unconventional mechanism involving a translational enhancer element and ribosomal protein S1. Binding of S1 to an AU-rich sequence within the 5' untranslated region of the manY transcript promotes translation of the mRNA, and base-pairing of SgrS to the same site can interfere with this process. Therefore, instead of blocking translation initiation by occluding the manY RBS, SgrS reduces ManY synthesis by inhibiting S1-dependent translation activation. These findings increase the base-pairing window for sRNA-mediated gene expression control in bacteria and highlight the role of ribosomal protein S1 for translation initiation.

Indexed as

Peptide Chain Initiation, Translational5' Untranslated RegionsBacteriaBase PairingBinding SitesEnhancer Elements, GeneticGene Expression Regulation, BacterialProtein BiosynthesisRibosomal ProteinsRibosomesRNA, BacterialRNA, MessengerRNA, Small Untranslated5' Untranslated RegionsRibosomal Proteinsribosomal protein S1RNA, BacterialRNA, MessengerRNA, Small UntranslatedenhancerHfqpost-transcriptional regulationsmall RNAtranslation initiation

Identifiers

PMID32367584
PMCPMC7534054
OpenAlexW3022834911

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.