Evidence map›Paper›PMID 32367066›Full record

ReviewNature reviews. Microbiology2020

Viral genomics in Ebola virus research.

Nicholas Di Paola, Mariano Sanchez-Lockhart, Xiankun Zeng, Jens H Kuhn, Gustavo Palacios

Abstract readReview
In one paragraph

Review in Nature reviews. Microbiology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 1 synthesis or guideline pooled it.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Nicholas Di PaolaUnited States Army Medical Research Institute of Infectious Diseases, Fort Detrick, Frederick, MD, USA.
Mariano Sanchez-LockhartUnited States Army Medical Research Institute of Infectious Diseases, Fort Detrick, Frederick, MD, USA.
Xiankun ZengUnited States Army Medical Research Institute of Infectious Diseases, Fort Detrick, Frederick, MD, USA.
Jens H KuhnIntegrated Research Facility at Fort Detrick, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Frederick, MD, USA.
Gustavo PalaciosUnited States Army Medical Research Institute of Infectious Diseases, Fort Detrick, Frederick, MD, USA. gustavo.f.palacios.civ@mail.mil.ORCID http://orcid.org/0000-0001-5062-1938

Funding

NIAID NIH HHS HHSN272200700016INIAID NIH HHS HHSN272201800013C
6 · The paper itself

Abstract

Filoviruses such as Ebola virus continue to pose a substantial health risk to humans. Advances in the sequencing and functional characterization of both pathogen and host genomes have provided a wealth of knowledge to clinicians, epidemiologists and public health responders during outbreaks of high-consequence viral disease. Here, we describe how genomics has been historically used to investigate Ebola virus disease outbreaks and how new technologies allow for rapid, large-scale data generation at the point of care. We highlight how genomics extends beyond consensus-level sequencing of the virus to include intra-host viral transcriptomics and the characterization of host responses in acute and persistently infected patients. Similar genomics techniques can also be applied to the characterization of non-human primate animal models and to known natural reservoirs of filoviruses, and metagenomic sequencing can be the key to the discovery of novel filoviruses. Finally, we outline the importance of reverse genetics systems that can swiftly characterize filoviruses as soon as their genome sequences are available.

Indexed as

AfricaAnimalsDisease OutbreaksEbolavirusFemaleGenome, ViralGenomicsHemorrhagic Fever, EbolaHost-Pathogen InteractionsHumansMaleMarburgvirusMarburg Virus DiseaseMolecular EpidemiologyReverse GeneticsVirus Replication

Identifiers

PMID32367066
PMCPMC7223634

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.